Pairwise Alignments

Query, 502 a.a., cell wall degradation protein from Caulobacter crescentus NA1000

Subject, 520 a.a., L,D-transpeptidase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  102 bits (254), Expect = 3e-26
 Identities = 83/302 (27%), Positives = 129/302 (42%), Gaps = 65/302 (21%)

Query: 258 AALNIPVERRIDQIVANMERWRWLPQTLPAERIQVNVAAAILSVFHHDTPTLTMRAVTGR 317
           A LN   E     ++ NMER+RW         +QVN+    L+        +TM+   G 
Sbjct: 212 AYLNADAESEKRILLLNMERFRWKMPETGDNYVQVNIPDFRLTWLDKTDTVITMKVCVGG 271

Query: 318 PGD-----------------------ETPMLSSMIHSIVLNPPWNVPQSIASKEIWPKER 354
             +                       ETP+L S I+SI  NP WN+P SIA  EI+   R
Sbjct: 272 KRENGYEDKLKAFAKSGNLDDKPKNHETPLLFSKINSIQANPIWNIPVSIAQSEIYWMAR 331

Query: 355 ASPGYLARNDFIVI--------PIEGGGTR---------LQQKAGPLAALGKVKFDFNNP 397
             P YL+ ++  V         P      R          +Q +G   ALGK KF F+N 
Sbjct: 332 KDPYYLSNSNIKVYYKDKLIGEPDTINWNRYSRDKLPFKFKQGSGGGNALGKFKFIFDNS 391

Query: 398 YGVYLHDTPSRSRFDSFSRLASHGCVRLQKPIELVNEVMRDDPT---------------- 441
             +YLHDT +++ F+  +R  SHGCVR++KP+E    +++D  T                
Sbjct: 392 SSIYLHDTNNKNGFNLSNRAISHGCVRIEKPLEFAELLVKDSYTYDKLRAEVDLPPIDST 451

Query: 442 ---WTPEKVNETLASGETVRAK-----LPQQIAVYLLYWTAYVTPDGQVNFRQDPYGWDR 493
              W  +++ +   + +T + K       + + + + Y TA+   D ++ +R D YG D 
Sbjct: 452 HVKWYKKRMAQKADTLKTFQLKPAWFAPKKNVPLIITYITAWAQND-RIEYRPDVYGMDE 510

Query: 494 DL 495
            L
Sbjct: 511 KL 512