Pairwise Alignments

Query, 446 a.a., chaperone protein dnaK from Caulobacter crescentus NA1000

Subject, 484 a.a., hypothetical heat shock protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  115 bits (288), Expect = 3e-30
 Identities = 115/409 (28%), Positives = 175/409 (42%), Gaps = 63/409 (15%)

Query: 66  ANERVVEAGPWAIEAYLEDPLETRFIQSFKTFAASAAFTETRILNKRYQFEDLLAAFLLR 125
           A    V  G  A+ AYLE P E  +++S K+F  +      ++      FED++   +  
Sbjct: 84  AESPAVFVGEQAVAAYLEMPEEGFYVRSPKSFLGATGLRPEQVA----LFEDIVTLMMQH 139

Query: 126 LRDHAGAQL------SELPPRI---IVGRPVTFAGSSPDEA--LALTRYEAAFERLGFTD 174
           ++  A A L      S+   RI   ++GRPV F G   +E+   A      A +R GF D
Sbjct: 140 IKVRAEAVLVQKGMASKDEARITHAVIGRPVNFQGIGGEESNRQAEAILTLAAKRAGFVD 199

Query: 175 IRYAYEPVGAAFFFARQLKQDATVLVADFGGGTSDFSLVR--------FERAADGTLRST 226
           + + +EP+ A   +   LK D TVLV D GGGT+D S+V+        F+R+ D      
Sbjct: 200 VAFLFEPLAAGMDYEAGLKADQTVLVVDVGGGTTDCSVVKMGPSHKASFDRSRD------ 253

Query: 227 PLSRSGVGVAGDAFDYRIIDQLVSPELGKGSDYRSFSNSLPIPQRYYAAFARWDQLAL-- 284
            L  SG  + G+  D  +      P  G GS     SN  P+P   +     W+ +A+  
Sbjct: 254 CLGHSGQRIGGNDLDIALAMNAFMPHFGLGS---LMSNGKPMPSNPF-----WNAVAVND 305

Query: 285 LRASKDM------RDIRALERTAVEPDKIAALIEVLDGNHGYALYRSVSALKEALSSQDQ 338
           + A ++       + I  L + A +P+ +  L++V      Y + R     K ALS    
Sbjct: 306 ISAQREFATLSTRKLIDELIKEAEQPNLLKRLLKVQQQQLSYQIVRLAERAKIALSDAHT 365

Query: 339 ATFRFEAGSVRIEKPVARVEFEAWIAPELAAIETAVGQALDQA--DLT-----------E 385
                E     +   V R  FE  I P L  IE  + QAL QA   LT           E
Sbjct: 366 TESSLEFIEAMLSAEVNRDCFENAIEPSLGKIEALMHQALTQAAKSLTGNGLAPEELSVE 425

Query: 386 AGV-----DRVFLTGGSSFVPAVREIFLRRFGADKIETGGEFESIASGL 429
           AG      D +++TGG++  PA+       +    +  G  F S+ +GL
Sbjct: 426 AGTAECQPDVIYVTGGTARSPAIYAKITSLYPDTPVVVGDHFGSVTAGL 474