Pairwise Alignments

Query, 221 a.a., IS200-like transposase from Caulobacter crescentus NA1000

Subject, 241 a.a., transposase from Ralstonia sp. UNC404CL21Col

 Score =  106 bits (264), Expect = 4e-28
 Identities = 80/228 (35%), Positives = 103/228 (45%), Gaps = 16/228 (7%)

Query: 1   MARLARTVFEGVPHHVTQRGNGRAQTFFSDADFQLYRDLLAENAVKANVEVWGWVLMPNH 60
           MARL R     VP HV QRGN R   F  D D+  Y D L   A + +  + G+ LMPNH
Sbjct: 1   MARLPRLSPIDVPVHVLQRGNNRQTVFRGDDDYAFYLDTLRMAAREHDFAIHGFSLMPNH 60

Query: 61  VHLILVPSDPDGLRRCLAPTHRRYAGVIHAREKRTGHFWQGRFGCVPMDEAH-LGAALRY 119
           VHL+  P   D L R L    RRY    +A   R+G  W+GRF    +D A  +   L Y
Sbjct: 61  VHLVGTPKVADSLSRTLQAVGRRYTRYFNAAADRSGTLWEGRFRSTVLDPAEWVLPILLY 120

Query: 120 VALNPVRARLVDRAEDWRWSSL--HACLD--PARGD-------GLTRTEPVLSRYPDFAA 168
           V  N  RA LV   E+ RWS+   H  +   P   D       G T  E    R   +  
Sbjct: 121 VESNATRAGLVSTPEEDRWSTYRHHVGIQSIPWVSDHYCYWRLGNTPFE----RQSRYRT 176

Query: 169 MLADGEDEAGSVALRRAETIGRPVGEAVFLEDLERRSGRSLSPAKRGR 216
           +  +G        +R+    G P+G   FL  L R  GR ++P  +GR
Sbjct: 177 LWHEGLGSDQLTEIRQHVHSGWPLGNEAFLATLARTGGRRVAPLPKGR 224