Pairwise Alignments

Query, 221 a.a., IS200-like transposase from Caulobacter crescentus NA1000

Subject, 235 a.a., transposase from Burkholderia phytofirmans PsJN

 Score = 97.4 bits (241), Expect = 2e-25
 Identities = 68/228 (29%), Positives = 102/228 (44%), Gaps = 10/228 (4%)

Query: 1   MARLARTVFEGVPHHVTQRGNGRAQTFFSDADFQLYRDLLAENAVKANVEVWGWVLMPNH 60
           MARLAR      P HV  RG  +   F  D D++L+ D L   +   ++ +  + LMP  
Sbjct: 1   MARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAASRDHHLSIHAYALMPGA 60

Query: 61  VHLILVPSDPDGLRRCLAPTHRRYAGVIHAREKRTGHFWQGRFGCVPMD-EAHLGAALRY 119
           V L++ P++   L + +    RRY    + R  R G  W+GR+    ++ E +   A R 
Sbjct: 61  VQLLVTPTEESSLPKAMQAVGRRYVAHFNRRYARRGTLWEGRYRATVIEGERYFLLASRV 120

Query: 120 VALNPVRARLVDRAEDWRWSSLHACLDPARGDGLTRTEPV--------LSRYPDFAAMLA 171
           V + PVRA LV   ED+RWSS    +     D L    P+          R   +  +  
Sbjct: 121 VEMCPVRAGLVSAPEDYRWSSYRHHIGLTL-DSLITDHPLYWSLGNTPFERQRAYRELCE 179

Query: 172 DGEDEAGSVALRRAETIGRPVGEAVFLEDLERRSGRSLSPAKRGRKPK 219
              DE  +  L++A   G  +G   + E   R + R +SP  RGR  K
Sbjct: 180 QPLDEREASQLQQATLKGWVLGSETYREWAARAANRRVSPLPRGRPRK 227