Pairwise Alignments

Query, 261 a.a., cystine-binding protein from Caulobacter crescentus NA1000

Subject, 264 a.a., Cystine ABC transporter, periplasmic cystine-binding protein FliY from Pseudomonas fluorescens FW300-N1B4

 Score =  268 bits (684), Expect = 1e-76
 Identities = 139/265 (52%), Positives = 191/265 (72%), Gaps = 5/265 (1%)

Query: 1   MRFPA--RRAVLSGLGLALLAACGKKPDAGASGWDRIKASGKLRVGLEGTYPPFNFQDKS 58
           M F A  R  ++  LGLAL A    +  AG     +IK +G + VGLEGTYPPF+F D++
Sbjct: 1   MNFSALRRNLLVGSLGLALSAGLLGQAVAGEQ-LQKIKDAGVINVGLEGTYPPFSFVDEA 59

Query: 59  GQLAGFEVDFAKALAEQLGVKAEFSPAPFAGLLGSLESGRIDVVINQITITPDRQAKYDF 118
           G+L+GFEV+F++ALA++LGVK +  P  + G+L +LES R+D VINQ+TIT +R+ KYDF
Sbjct: 60  GKLSGFEVEFSEALAKELGVKVKLQPTKWEGILAALESKRLDAVINQVTITEERKKKYDF 119

Query: 119 SEPYTVSGIQIIAL-KGKPAPTGPEGLTGKKVGVGLGTNYEQWLRANVPTADVRTYDDDP 177
           S PYTVSGIQ + L K K        L GKKVGVGLGTNYEQW++ NVP ADVRTY+DDP
Sbjct: 120 STPYTVSGIQALTLTKNKDTIKTAADLAGKKVGVGLGTNYEQWVKENVPKADVRTYEDDP 179

Query: 178 TKYQDLRAGRIDAVLNDRLVAADFVKTSPEFVASGQPFAAQGSGVAMQK-DPALKVVINQ 236
           +K+QDLR GRIDA+L DRL A ++ + + +  A+G+ F+ Q +G+A++K +P L   +N+
Sbjct: 180 SKFQDLRVGRIDAILIDRLAALEYARKAKDTAAAGEAFSRQEAGIALRKGEPELLAAVNK 239

Query: 237 AINALRANGKLAAISQQWFGMDVTQ 261
           AI+ LRA+G L  +S+++F  DVTQ
Sbjct: 240 AIDKLRADGTLKKLSEKYFSADVTQ 264