Pairwise Alignments

Query, 483 a.a., deoxyribodipyrimidine photolyase from Caulobacter crescentus NA1000

Subject, 520 a.a., Deoxyribodipyrimidine photolyase (EC 4.1.99.3) from Xanthomonas campestris pv. campestris strain 8004

 Score =  437 bits (1124), Expect = e-127
 Identities = 232/471 (49%), Positives = 294/471 (62%), Gaps = 12/471 (2%)

Query: 18  IVWFRKDLRIADNPALRHAAQSGRPVIPLYI-LDETPGIRPMGGASLWWLDKSLKSLAAS 76
           IVWFR+DLR+ DNPALR A  +G   IPLYI      G    G AS  W  +SL +L AS
Sbjct: 53  IVWFRRDLRLEDNPALRAALDAGHDPIPLYIDAPHEEGQWAPGAASRAWRHRSLAALDAS 112

Query: 77  LETLGTKLVLRKGVAAEVLDQLIAQSGARSVVWNRLYDKPSTDRDAAIKAALRDRGVDCQ 136
           L   G+ L++R+G +A+VLD +IAQ+ A +V WNR Y+  +  RDA IK +LR+RG++ Q
Sbjct: 113 LRARGSALLIRQGDSAQVLDAVIAQTEAVAVYWNRKYEPATQPRDAQIKRSLRERGLEVQ 172

Query: 137 SFNAGLLNEPWTVKNGSDQPYKVFTPYWRAAREHLTDVAVTAAPGHLVAPARFPASESLA 196
           S NA LL EPWT+     +PYKVFTP+WR A   L       AP  L           + 
Sbjct: 173 SCNAALLFEPWTLATQQGRPYKVFTPFWRNALTQLRLPDAMPAPRSLPPLPASLDGVHVD 232

Query: 197 SWNLHPTKPDWSKGF-DLWTPGEAGAHARLDAFLKGPIKGYGDQRDIPGVEATSKLSPHL 255
           + NL PT P W +GF + W PGEAGAH  L+ F+ G + GY + RD P    TS+LSPHL
Sbjct: 233 ALNLLPT-PAWDQGFWEHWQPGEAGAHEMLEIFVDGALSGYRENRDRPDRVGTSQLSPHL 291

Query: 256 HFGEIGPRQVWL---ATRSAADQGDIPLAEADKFLSEIGWREFNHSILYNWPHMPSANFK 312
           HFGEI P ++     A RSA +  DI     D ++ ++GWR+F + +L+++P   + N  
Sbjct: 292 HFGEIAPWRIASTLEAQRSARNGADI-----DGYIRQLGWRDFAYHLLHHFPDTTTQNLN 346

Query: 313 PEFDGFPWVK-DEGALEAWKRGQTGYPIVDAGMRELWTTGFMHNRVRMIVASFLIKHLMI 371
           P F GF W   D   L+AW+RG+TG PIVDAG+R+LW TG+MHNRVRMIVAS L KHL +
Sbjct: 347 PRFAGFDWATVDPVTLDAWQRGRTGIPIVDAGLRQLWHTGWMHNRVRMIVASLLCKHLRV 406

Query: 372 DWREGEAWFWDTLLDADLANNVGNWQWTAGSGADAAPYFRIFNPIAQGEKFDPKGDYVRR 431
            W EG  WFWDTL+DADLANN   WQW AG+GADAAPYFR+FNP+ Q EKFDP+  Y+ R
Sbjct: 407 HWLEGARWFWDTLVDADLANNTMGWQWVAGTGADAAPYFRVFNPVTQAEKFDPQATYITR 466

Query: 432 WVPELRNVSDDVIHKPWTKPLHLPAGAKRLYSRPIVDHAMARARALEAYHG 482
           W+PEL  +       PW  PL L   A      PI+  A  R  AL AY G
Sbjct: 467 WIPELAALPVKERFAPWLHPLSLARLAPTYPRAPIIGLAEGRDAALAAYAG 517