Pairwise Alignments

Query, 483 a.a., deoxyribodipyrimidine photolyase from Caulobacter crescentus NA1000

Subject, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

 Score =  278 bits (712), Expect = 2e-79
 Identities = 181/485 (37%), Positives = 242/485 (49%), Gaps = 45/485 (9%)

Query: 18  IVWFRKDLRIADNPALRHAAQSGRPVIPLYILDETPG------IRPMGGASLWWLDKSLK 71
           +VWFR+DLR  DN AL  A  SG PV  +YI   TP       + P+    +W   + L 
Sbjct: 3   LVWFRRDLRSFDNTALTAALNSGDPVAAMYIA--TPEQWHQHHLAPIQADLIW---RRLA 57

Query: 72  SLAASLETLGTKLVLRK----GVAAEVLDQLIAQSGARSVVWNRLYDKPSTDRDAAIKAA 127
            L   L  L   L  ++      AA  + QL     A  V+ NR Y+     RD   +  
Sbjct: 58  ELQQELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQL 117

Query: 128 LRDRGVDCQSFNAGLLNEPWTVKNGSDQPYKVFTPYWRAAREHLTDVAVTAAPGHLVAPA 187
           L ++G+   +F+   +  P +V+    + +KVFTP+ RA    LT          L  P 
Sbjct: 118 LSEQGIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRA---WLT----------LFQPP 164

Query: 188 RFPASESLASWNLHPTKPD--W--SKGFDL-------WTPGEAGAHARLDAFLKGPIKGY 236
               +  +A WN+     +  W   + FD        W        A+L  F +  ++ Y
Sbjct: 165 VIGKNRPVALWNVPSALAELVWHPEQAFDYPRIDSTPWAADFETVRAQLRDFCRERVQDY 224

Query: 237 GDQRDIPGVEATSKLSPHLHFGEIGPRQVWLATRSAADQGDIPLAEADKFLSEIGWREFN 296
              RD P  E TS LSP+L  G +  RQ        +  G++    A  +LSE+ WREF 
Sbjct: 225 HQARDFPAREGTSSLSPYLAIGVLSARQCVARLYHESSMGELSEG-AQVWLSELIWREFY 283

Query: 297 HSILYNWPHMPSANFKPEFDG-FPWVKDEGALEAWKRGQTGYPIVDAGMRELWTTGFMHN 355
             ++   P++  +    E+     W  D    + W  G+TGYPIVDA MR+L  TG+MHN
Sbjct: 284 QHLVAIEPNLSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHN 343

Query: 356 RVRMIVASFLIKHLMIDWREGEAWFWDTLLDADLANNVGNWQWTAGSGADAAPYFRIFNP 415
           R+RMIVASFL K L IDWR GE +F   L+D D A N G WQW A +G D  PYFRIFNP
Sbjct: 344 RLRMIVASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNP 403

Query: 416 IAQGEKFDPKGDYVRRWVPELRNVSDDVIHKPWTKPLHLPAGAKRLYSRPIVDHAMARAR 475
           ++QGEKFDP GD++RRWVPELR+VS   IH+PWT     PA    LY   +VDH   R  
Sbjct: 404 VSQGEKFDPNGDFIRRWVPELRSVSSAYIHQPWT----YPAVNSVLYPARLVDHKQEREV 459

Query: 476 ALEAY 480
            L  Y
Sbjct: 460 TLRLY 464