Pairwise Alignments

Query, 483 a.a., deoxyribodipyrimidine photolyase from Caulobacter crescentus NA1000

Subject, 424 a.a., deoxyribodipyrimidine photolyase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  123 bits (308), Expect = 1e-32
 Identities = 116/441 (26%), Positives = 187/441 (42%), Gaps = 48/441 (10%)

Query: 17  VIVWFRKDLRIADNPALRHAAQSGRPVIPLYILDETP------GIRPMGGASLWWLDKSL 70
           ++VWFR DLR+ DN  L  A      ++P+YILD         G    G     ++ +S+
Sbjct: 5   ILVWFRNDLRLHDNEMLVEAIAKSDSILPVYILDRRSFGETKYGTLKTGNIRAQFILESV 64

Query: 71  KSLAASLETLGTKLVLRKGVAAEVLDQLIAQSGARSVVWNRLYDKPSTDRDAAIKAALRD 130
             L  SL+ +G  L++ +G   +++ QL  +     V  +R   +  T     ++ AL  
Sbjct: 65  LGLRNSLKQIGGNLLIAEGNPEDIIPQLAQEYEITEVYHHREVAREETHVSTLVENALWK 124

Query: 131 RGVDCQSFNAGLLNEPWTVKNGSDQPYKVFT---PYWRAAREHLTDVAVTAAPGHLVAPA 187
             ++ + F         T+ N  D P+ +      + +  ++   D  +       +AP 
Sbjct: 125 LRINLKHFIGH------TLYNKEDLPFPIKDIPDAFNQFKKKIERDSIIKPC---FLAPD 175

Query: 188 RFPASE--------SLASWNLHPTKPDWSKGFDLWTPGEAGAHARLDAFLKGPIKGYGDQ 239
           R   +E        SLA  +L P + D    F+       G  A   A L+  I      
Sbjct: 176 RINVAEVIDWGILPSLADLDLLPQQKDQRADFEF-----VGGEAEGLAHLQKVIVAMQQA 230

Query: 240 RDIPGVEATSKLSPHLHFGEIGPRQVWLATRSAADQGDIPLAEA--DKFLSEIGWREFNH 297
                +   SKLS  L  G + PR+V+   +       +P  +A  +  L  + WR++  
Sbjct: 231 ATTKNLILASKLSAWLAMGSLSPRKVYWEIKKMEG---VPNTKAMFNHILLGLLWRDY-- 285

Query: 298 SILYNWPHMPSANFKPEFDGF------PWVKDEGALEAWKRGQTGYPIVDAGMRELWTTG 351
              + +    +  F P  DGF        V ++     WK  QTG+ +VDA M EL  TG
Sbjct: 286 -FRFMFKKYGNTFFSP--DGFGSQGLIDIVNEQDNFNKWKNAQTGFAVVDAVMTELNQTG 342

Query: 352 FMHNRVRMIVASFLIKHLMIDWREGEAWFWDTLLDADLANNVGNWQWTAGSGADAAPYFR 411
           F+ N  R   A +LI +L + W  G A+F + L+D + A+N GNW   AG G D      
Sbjct: 343 FISNIARQTAALYLINNLEVSWIFGAAYFEEKLIDYNPASNWGNWANVAGVGNDQKSK-S 401

Query: 412 IFNPIAQGEKFDPKGDYVRRW 432
           +F+     +  DPKG+Y   W
Sbjct: 402 VFDLDKNIKNLDPKGNYSLTW 422