Pairwise Alignments

Query, 288 a.a., cytochrome cbb3 oxidase, diheme subunit, membrane-bound ccoP from Caulobacter crescentus NA1000

Subject, 325 a.a., cytochrome C oxidase Cbb3 from Pseudomonas fluorescens FW300-N2E3

 Score =  162 bits (409), Expect = 1e-44
 Identities = 99/296 (33%), Positives = 149/296 (50%), Gaps = 34/296 (11%)

Query: 13  ETTGHEWDGIRELDNPLPRWWLWIWYATIAFSIGYWVLMPA---WPGL------------ 57
           ET GH +DGI E DNPLP+WW  ++  TI F++GY VL P    W GL            
Sbjct: 38  ETVGHAFDGIEEYDNPLPKWWFMLFVGTIIFALGYLVLYPGLGNWKGLLPGYGYLDNEKQ 97

Query: 58  NGYTKGLLNKSDRAEVGQELKALEAHRGEGAAMLRTASLEQIEKDPKLQAYAQQVGQSVF 117
             +  G    +   E  +E+   +A  G   A      +E++ KDP+    A ++G  +F
Sbjct: 98  TAFANGQSGWTGVHEWEKEMAKSDAKFGPIFAKFAAMPIEEVAKDPQ----ALKMGGRLF 153

Query: 118 GDNCATCHGIGGTGSKGYANLRDDVWLWGGKLEDIQYTITHGIRSGAEGARVSQMPAYGR 177
             NC+ CHG    G+ G+ NL D+ W WGG+ + I+ TI         G R + MPA+G 
Sbjct: 154 ASNCSVCHGSDAKGAYGFPNLTDEDWRWGGEPQTIKTTIM--------GGRHAMMPAWG- 204

Query: 178 DEMLKPEQIDDLTEYVV-NLSRRPANAAAVA---RATPLFEAQCSACHGPQGQGNQQLGA 233
            E++  + + D+  +V+ NL  R     A A       +F A C ACHGP+G+G   +GA
Sbjct: 205 -EVIGEQGVSDVAAFVLTNLDGRKLPEGAKADPVAGQKIFAANCVACHGPEGKGTPAMGA 263

Query: 234 PNLT-DADWLFGADRASIRGQIYAGNGGVMPAWSGRLSPETIKALTVYIHSNAGGQ 288
           PNLT  A +++G+  A ++  I  G  G MPA       + +  L  Y++S + G+
Sbjct: 264 PNLTHPAAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQGNDKVHLLAAYVYSLSHGE 319