Pairwise Alignments

Query, 288 a.a., cytochrome cbb3 oxidase, diheme subunit, membrane-bound ccoP from Caulobacter crescentus NA1000

Subject, 308 a.a., cytochrome oxidase subunit III from Cupriavidus basilensis FW507-4G11

 Score =  194 bits (492), Expect = 3e-54
 Identities = 113/290 (38%), Positives = 162/290 (55%), Gaps = 22/290 (7%)

Query: 2   ADRKIDDATGV-ETTGHEWDG-IRELDNPLPRWWLWIWYATIAFSIGYWVLMPAWPGLNG 59
           + RK+    G  E TGH WDG +REL+NPLPRWW+W++     F +GY VL   +PGL  
Sbjct: 30  SQRKVTKVVGAPEDTGHVWDGDLRELNNPLPRWWMWMFLLACIFGLGYLVL---YPGLGS 86

Query: 60  YTKGLLNKSDRAEVGQELKALEAHRGEGAAMLRTASLEQIEKDPKLQAYAQQVGQSVFGD 119
           Y  G+L  S R E+    +A E  + E         ++Q+  +P     A+++GQ +F +
Sbjct: 87  YA-GVLKTSSRVELEAHRQAAEQLQREVYGKYMQMDVKQVAAEPA----AREIGQRLFLN 141

Query: 120 NCATCHGIGGTGSKGYANLRDDVWLWGGKLEDIQYTITHGIRSGAEGARVSQMPAYGRDE 179
            CA CHG    GS+G+ NL D+ WL+GG  E I  TIT G R+G        MP++    
Sbjct: 142 YCAQCHGSDARGSRGFPNLTDNDWLYGGDPETITQTITKG-RNGV-------MPSFA--S 191

Query: 180 MLKPEQIDDLTEYVVNLSRRPANAAAVARATPLFEAQCSACHGPQGQGNQQLGAPNLTDA 239
            +  +   D+ +YV +LS   ++    +R    F++ C+ACHG  G+GNQ LGAPNL+D 
Sbjct: 192 TIDGKLAGDVAQYVRSLSGLSSDPIRASRGESTFKSTCAACHGSTGKGNQALGAPNLSDR 251

Query: 240 DWLFGADRASIRGQIYAGNGGVMPAWSGRLSPETIKALTVYIH--SNAGG 287
            WL+G+  A+I   I  G+   MPA    L+PE I+ LT Y+   SN GG
Sbjct: 252 VWLYGSSEANIVDAILKGHNNHMPAHEEILTPERIRMLTAYVWGLSNIGG 301