Pairwise Alignments

Query, 288 a.a., cytochrome cbb3 oxidase, diheme subunit, membrane-bound ccoP from Caulobacter crescentus NA1000

Subject, 307 a.a., cytochrome-c oxidase, cbb3-type subunit III from Ralstonia sp. UNC404CL21Col

 Score =  187 bits (476), Expect = 2e-52
 Identities = 111/284 (39%), Positives = 154/284 (54%), Gaps = 22/284 (7%)

Query: 2   ADRKIDDATGV---ETTGHEWDG-IRELDNPLPRWWLWIWYATIAFSIGYWVLMPAWPGL 57
           + R+I  A G    E TGH WDG +REL+NPLPRWW+W++  +  F++GY +L   +PGL
Sbjct: 30  SQRRIQVAPGQSAGEDTGHVWDGDLRELNNPLPRWWMWMFLLSCIFALGYLIL---YPGL 86

Query: 58  NGYTKGLLNKSDRAEVGQELKALEAHRGEGAAMLRTASLEQIEKDPKLQAYAQQVGQSVF 117
             Y  G+L  S R E+  +    +A             ++QI  DP+    A ++GQ +F
Sbjct: 87  GAYG-GVLGFSTRGELASQRAVADAQVRPLYERYAGMDIKQIAADPQ----AHEIGQRLF 141

Query: 118 GDNCATCHGIGGTGSKGYANLRDDVWLWGGKLEDIQYTITHGIRSGAEGARVSQMPAYGR 177
            +NCA CHG    GSKG+ NL D  WL+GG+ + I  TIT G        R   MP+   
Sbjct: 142 LNNCAQCHGSDAGGSKGFPNLTDGDWLYGGEPDTILTTITKG--------RHGVMPSLAA 193

Query: 178 DEMLKPEQIDDLTEYVVNLSRRPANAAAVARATPLFEAQCSACHGPQGQGNQQLGAPNLT 237
             ++   Q  ++  YV +LS    +    AR  P F++ C+ACH   G+GNQ LGAPNLT
Sbjct: 194 --VVDGNQAVNVANYVRSLSGLSYDPIKAARGEPTFKSVCAACHMATGKGNQALGAPNLT 251

Query: 238 DADWLFGADRASIRGQIYAGNGGVMPAWSGRLSPETIKALTVYI 281
           D  WL+G+  A+I   I  G    MPA    LSPE I+ L  Y+
Sbjct: 252 DRVWLYGSSEATIVETILKGRDNTMPAHENLLSPEKIRMLAAYV 295



 Score = 51.6 bits (122), Expect = 2e-11
 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 212 LFEAQCSACHGPQGQGNQQLGAPNLTDADWLFGADRASIRGQIYAGNGGVMPAWSGRLSP 271
           LF   C+ CHG    G++  G PNLTD DWL+G +  +I   I  G  GVMP+ +  +  
Sbjct: 140 LFLNNCAQCHGSDAGGSK--GFPNLTDGDWLYGGEPDTILTTITKGRHGVMPSLAAVVDG 197

Query: 272 ETIKALTVYIHSNAG 286
                +  Y+ S +G
Sbjct: 198 NQAVNVANYVRSLSG 212