Pairwise Alignments

Query, 548 a.a., cytochrome cbb3 oxidase subunit I ccoN from Caulobacter crescentus NA1000

Subject, 480 a.a., cytochrome C oxidase Cbb3 from Pseudomonas fluorescens FW300-N2E3

 Score =  592 bits (1526), Expect = e-173
 Identities = 283/476 (59%), Positives = 350/476 (73%), Gaps = 6/476 (1%)

Query: 72  PDEYSDNVVKAGVIATMFWGAAGLLVGVIIAAQLSWPTIFYFPDLGFLNFGRLRPLHTSA 131
           P  Y+  VV+   I T+ WG  G+ +GV IA+QL WP + +   L +  FGRLRPLHT+ 
Sbjct: 7   PTAYNYKVVRQFAIMTVVWGILGMGLGVFIASQLVWPELNF--GLPWTTFGRLRPLHTNL 64

Query: 132 VIFAFGGNALIATSFYVVQRTCKARLAGGITPWFVFWGYQLFIVLAATGYLMGATSGKEY 191
           VIFAFGG AL ATS+YVVQRTC+ RL       F FWG+Q  IV A     +G T+ KEY
Sbjct: 65  VIFAFGGCALFATSYYVVQRTCQTRLISDSLAAFHFWGWQAVIVGAIVTLPLGYTTTKEY 124

Query: 192 SEPEWYTDLWLTIVWVAYLLVFLGTIWKRKEPHIYVANWFYLAFIVTVALLHVVNNAAVP 251
           +E EW   + L IVWV Y LVF GTI KRK  HIYV NWFY AFIV  A+LH+VN+A++P
Sbjct: 125 AELEWPLAILLAIVWVTYGLVFFGTIVKRKTKHIYVGNWFYGAFIVVTAMLHIVNHASLP 184

Query: 252 VGLLNHKSYGVFAGVQDALVQWWYGHNAVGFFLTAGFLAMMYYFVPRRVERPVYSYRLSI 311
           V     KSY  +AG  DA++QWWYGHNAVGFFLT GFL MMYYFVP++ ERP+YSYRLSI
Sbjct: 185 VSFF--KSYSAYAGATDAMIQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIYSYRLSI 242

Query: 312 VHFWALIFIYIWAGPHHLHYTALPQWAQTLGMTFSIMLWMPSWGGMINGLMTLSGAWDKL 371
           VHFWALI +YIWAGPHHLHYTALP WAQ+LGM  SI+L  PSWGGMING+MTLSGAW KL
Sbjct: 243 VHFWALITLYIWAGPHHLHYTALPDWAQSLGMAMSIILLAPSWGGMINGMMTLSGAWHKL 302

Query: 372 RTDPVVRMMVVSIAFYGMSTFEGPVMSIRAVNALSHYTDWTIGHVHSGALGWVGFISFGA 431
           RTDP++R +VVS+AFYGMSTFEGP+M+I+ VN+LSHYTDWTIGHVH+GALGWV  IS GA
Sbjct: 303 RTDPILRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGA 362

Query: 432 IYCLVPWLWKKPGMYSNKLIEWHFWIATTGILLYIAAMWVSGVMEGLMWREYTPQGFLAY 491
           +Y ++P ++ +  M+S  LI  HFW+AT G +LYIA+MWV+G+ +GLMWR     G L Y
Sbjct: 363 LYHMIPKIFGRAQMHSIGLINTHFWLATIGTVLYIASMWVNGITQGLMWRAINDDGTLTY 422

Query: 492 SFIETVSAKHIENVIRTVGGLMYLSGALIMIVNMWKTIASPSAAPADASAAPATAI 547
           SF+E + A H   ++R +GG  + SG L M  N+++T+ + +  P DA AA   A+
Sbjct: 423 SFVEALQASHPGFIVRALGGAFFASGMLFMAYNVFRTVRASN--PEDAEAAAQIAV 476