Pairwise Alignments

Query, 184 a.a., chemotaxis receiver domain protein cheYIII from Caulobacter crescentus NA1000

Subject, 266 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 71.6 bits (174), Expect = 1e-17
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 1   MEGMDFRDVSVLLVDDNANMRKVVGTMLKAAGVRRIREANDGLEGLKIFQTQEIDIIFTD 60
           ++  D +D+ VL+VDD+   R ++   L   G+R+I EA DG E +++ + Q  D++ TD
Sbjct: 137 LDHFDVQDLRVLVVDDSRMARNIIRRTLSNLGMRQIVEACDGAEAIELMREQMFDLVVTD 196

Query: 61  LMMQPVDGLAFIRWVRTSTASPNHFVPIIMMTGHATQRTLNEARMAGVTEFLAKPLTARG 120
             M  VDGL   +++R    S    +PI+M++  A    L+    AGV     KP   + 
Sbjct: 197 YNMPSVDGLELTQFIRNE--SQQSHIPILMVSSEANDAHLSNVCQAGVNALCDKPFEPQL 254

Query: 121 VMHRINEIVN 130
           V   + ++++
Sbjct: 255 VKQILYQLLD 264



 Score = 42.0 bits (97), Expect = 9e-09
 Identities = 25/123 (20%), Positives = 57/123 (46%), Gaps = 2/123 (1%)

Query: 8   DVSVLLVDDNANMRKVVGTMLKAAGVRRIREANDGLEGLKIFQTQEIDIIFTDLMMQPVD 67
           ++S+LLV+ +   RK++   LK  G+  I  A    E  +I    + D+I + +     D
Sbjct: 8   ELSILLVEPSDTQRKIIIASLKNEGILNIETAGGFDEARQILTEHKPDLIASAMHYSDGD 67

Query: 68  GLAFIRWVRTSTASPNHFVPIIMMTGHATQRTLNEARMAGVTEFLAKPLTARGVMHRINE 127
            L  + ++++ +   +  +  ++++    +  L   R +GV   L KP +   +   +N 
Sbjct: 68  ALKLLTYIKSDSRCQD--IQFMLVSSECRREQLEVFRQSGVVAILPKPFSKEHLGKALNA 125

Query: 128 IVN 130
            ++
Sbjct: 126 TID 128