Pairwise Alignments

Query, 273 a.a., uracil DNA glycosylase superfamily protein from Caulobacter crescentus NA1000

Subject, 253 a.a., putative uracil DNA glycosylase from Phaeobacter inhibens DSM 17395

 Score =  192 bits (487), Expect = 8e-54
 Identities = 117/268 (43%), Positives = 149/268 (55%), Gaps = 20/268 (7%)

Query: 1   MSFAVDQRAVESLLAFWADAGVEALYADAPIDRLAEGAAMLRAKSQPPPPPAPVARPGMA 60
           M  A+D  +  +LLA+  + G      DAP++R    A +       P P A  A    A
Sbjct: 1   MESALDYHSAHALLAWQIELGATDAIGDAPVNRYELQARL-------PKPGAAAAEVAPA 53

Query: 61  MVRSPDIASAVAAAKAAAAACNDLESLAAAIAAFEGCPLKSQGAKQAVFSRGVSDAQLMI 120
             R  D    V  A+  A A   LE L  A+  FE C LK +GA+  VF+ G   A++M+
Sbjct: 54  KPRDID---PVEVARQMAGAAGSLEGLYEALGQFEHCELK-KGARNLVFADGQPGARVMV 109

Query: 121 IGEGPGADEDAQGQPFVGRAGKLLDRMLKAAGL--EERVFITNTVFWRPPGNRTPTPQEQ 178
           +GE PG DED  G+PFVGRAG+LLDRML A GL  ++ V+I N + WRPP NR P P E 
Sbjct: 110 VGEAPGRDEDIAGKPFVGRAGQLLDRMLAAIGLSRKDSVYIANVLPWRPPQNRDPLPAEI 169

Query: 179 ATCAPFVERAIALVKPKMLLLAGGASAKAMLKRDEGILTMRGRWFEWVSEDQSLELPAMP 238
           A   PF+ER IAL KP +L+  G  S  A+L +  GI  MRG W E   +      P MP
Sbjct: 170 AMMTPFLERHIALAKPDILIAMGNISCDALLGK-RGITRMRGTWQEAQGK------PVMP 222

Query: 239 TLHPAFLLRTPAQKKKAWQDLLTLTERL 266
             HPA+LLR PAQK+ AW DLL +  RL
Sbjct: 223 MFHPAYLLRQPAQKRAAWADLLEIKARL 250