Pairwise Alignments

Query, 906 a.a., valyl-tRNA synthetase from Caulobacter crescentus NA1000

Subject, 953 a.a., valyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score =  901 bits (2329), Expect = 0.0
 Identities = 470/970 (48%), Positives = 616/970 (63%), Gaps = 91/970 (9%)

Query: 2   LEKTFDPQSVEPRLYAAWEASGAFKPAEDPNAEPFVIVIPPPNVTGSLHIGHALNNTLQD 61
           +EKT++PQS+E  LY  WE  G FKP  D +   + I+IPPPNVTGSLH+GHA  +T+ D
Sbjct: 1   MEKTYNPQSIEQALYRVWEEKGYFKPHGDASQGNYCIMIPPPNVTGSLHMGHAFQDTIMD 60

Query: 62  VLTRFHRMRGKAALWLPGTDHAGIATQMVVERQLAAAGNIGRRDMGREAFVDKVWEWKAE 121
            L R+ RM+GK  LW  GTDHAGIATQM+VER+L A     R D+GR+AF++KVWEWKA+
Sbjct: 61  TLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKLEAEQGKSRHDLGRDAFMEKVWEWKAQ 120

Query: 122 SGGAITNQLRRLGASCDWSRERFTLDEGLSAAVRKVFVQLYKQNLLYRDKRLVNWDPQFQ 181
           SGG IT+QLRR+GAS DW RERFT+DEGLS AV++VFV+LY   L+YR KRLVNWDP+  
Sbjct: 121 SGGTITSQLRRMGASVDWDRERFTMDEGLSNAVQEVFVRLYDDKLIYRGKRLVNWDPKLH 180

Query: 182 TAISDLEVEQKEVDGAYWHFAYPLADGVTYQHPIAFDEDGKATEFETRDYIVVATTRPET 241
           TAISDLEVE KE  G  WHF YPLA              G     + +DY+VVATTRPET
Sbjct: 181 TAISDLEVENKEKAGHMWHFRYPLA--------------GTELTADGKDYLVVATTRPET 226

Query: 242 MLGDTGVAVHPDDERYKGLVGKFVTLPIVGRRIPIVADDYADPTKGSGAVKITPAHDFND 301
           MLGD+ VAVHP+DERY  L+GK + LPIV RRIPI+AD+Y D   G+G VKITPAHDFND
Sbjct: 227 MLGDSAVAVHPEDERYASLIGKEIILPIVNRRIPIIADEYVDKDFGTGCVKITPAHDFND 286

Query: 302 FGVGKRAGLEAINILTVEA-----------------KLNDSVPAEYVGMDRFVARKAIVA 344
           + VGKR  L   NILT +A                 +L+ S+P  Y G+DRF AR AIVA
Sbjct: 287 YEVGKRHSLPMFNILTQDATIRALAEVLNTDGSHNSELDASLPERYAGLDRFKARDAIVA 346

Query: 345 RAEEEGWLKEIEKTKHMVPHGDRSGVVIEPFLTDQWYVDAKTLAQPALKAVETGETIFEP 404
             E  G L++IE     VP+GDRSGVVIEP LTDQWYV  + LAQPA++AVE G+  F P
Sbjct: 347 EFETLGLLEKIEPHALKVPYGDRSGVVIEPLLTDQWYVAVQKLAQPAIEAVENGDIKFVP 406

Query: 405 KHWEKTYFEWLRNIEPWCVSRQLWWGHRIPAWFGPEGSIFVEESEEAAYAAARAQFGADV 464
           + +E  YF W+R+I+ WC+SRQLWWGHRIPAW+   G ++V  SE+          G+DV
Sbjct: 407 QQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGKVYVGRSEDEV--RQNHNLGSDV 464

Query: 465 QLTQDEDVLDTWFSSALWPFSTLGWPEKTSDLERFYPTSTLVTGFDIIFFWVARMMMMGI 524
           +L QD+DVLDTWFSSALW FSTLGWPE+T +L+ F+PT  LVTGFDIIFFWVARM+MM +
Sbjct: 465 KLRQDDDVLDTWFSSALWTFSTLGWPEQTPELKTFHPTDVLVTGFDIIFFWVARMIMMTM 524

Query: 525 HFMGE------APFKQVFINALVRDEKGAKMSKSKGNVMDPLILIDEL------------ 566
           +F+ +       PFK V++  L+RDE G KMSKSKGNV+DPL +ID +            
Sbjct: 525 YFIKDEDGKPQVPFKTVYVTGLIRDEAGNKMSKSKGNVLDPLDMIDGIDLESLVQKRTGN 584

Query: 567 -------------------------GCDAVRFTLTAMSGQARDIKLSKQRIEGYRNFGTK 601
                                    G DA+RFTL AM+   RDI    +R++GYR+F  K
Sbjct: 585 MMQPQLAAKIEKSTRKEFENGIEPHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNK 644

Query: 602 LWNASRFAQMNECVRVEGFDPSTVQQPI-NKWIRGETVKTVAEVTKALEAPSFDEAAGAL 660
           LWNASR+  MN   +  G     ++  + ++W+ G+  +TV    + + A  FD AA  L
Sbjct: 645 LWNASRYVLMNTEEQDCGQGGGDMKLSLADRWVIGKFQETVKAFDEHINAYRFDLAANTL 704

Query: 661 YRFVWNVFCDWYLELAKPILNGDDAAAKAETRATAAWALDVILKLLHPVMPFITEELWEK 720
           Y F WN FCDWYLEL KP+L     A +  TR T    L+ +L+L+HP+MP+ITE +W++
Sbjct: 705 YEFTWNQFCDWYLELTKPVLQNGSEAEQRGTRHTLVTVLEQLLRLMHPMMPYITETIWDR 764

Query: 721 TAEFGPARETMLISAKWPELPADWIDAEAEAEIGWLVETVGEIRSIRAEMNVPPSAKPGL 780
                      L+   +PE  A  +DA+A A++ W+ + +  +R+IRAE+N+ PS     
Sbjct: 765 VKPLAGVEGDTLMLMSFPEFDAAKVDAKAMADLEWVKQVIVAVRNIRAELNIAPSKPLSA 824

Query: 781 TIVGAGPETKARLARHRDLLLTLARLDA---VREADAAPAGSAPVVMGEATGALGVAEFI 837
            + G   E KAR+  ++    TLA+L++   + E +AAP  +  ++ GE    + +A  I
Sbjct: 825 LLRGVSDEDKARIEANQAFFGTLAKLESMTILAEGEAAPMATTQLI-GEMELLIPMAGLI 883

Query: 838 DVAAEKARLTKDIAGHAGEIEKVNKKLGNPDFLARAKEEVVEENR----------ERLAE 887
           DVAAE AR+ K +    GE+ ++  KL N  F+A+A  EV+E+ R          ++L E
Sbjct: 884 DVAAEMARIDKQLEKLTGEVARIEGKLSNQGFVAKAPAEVIEKERAKAADIKRDMDKLTE 943

Query: 888 AEAAKAKLEA 897
            +A  AKLEA
Sbjct: 944 QKAELAKLEA 953