Pairwise Alignments

Query, 906 a.a., valyl-tRNA synthetase from Caulobacter crescentus NA1000

Subject, 1037 a.a., valyl-tRNA synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  486 bits (1252), Expect = e-141
 Identities = 259/511 (50%), Positives = 312/511 (61%), Gaps = 74/511 (14%)

Query: 2   LEKTFDPQSVEPRLYAAWEASGAFKPAEDPNA-EPFVIVIPPPNVTGSLHIGHALNNTLQ 60
           +EKTF+    EPRLYA WEA G F    + +  E F ++IPPPNVTGSLH+GHA NNTLQ
Sbjct: 3   MEKTFNAAEAEPRLYARWEAEGCFAAGANASRDETFCVMIPPPNVTGSLHMGHAFNNTLQ 62

Query: 61  DVLTRFHRMRGKAALWLPGTDHAGIATQMVVERQLAAAGNIGRRDMGREAFVDKVWEWKA 120
           D+L R+ RM+G   LW PGTDHAGIATQMV ER++AA G   R +MGR  F+ +VWE K 
Sbjct: 63  DILIRWKRMQGYDTLWQPGTDHAGIATQMVTEREMAANGEPTRAEMGRAKFLARVWEQKV 122

Query: 121 ESGGAITNQLRRLGASCDWSRERFTL-----------DEGLSAAVRKVFVQLYKQNLLYR 169
           +S G I  QL+R+GASCDWSRE FT+                 AV KVFV +Y + L+YR
Sbjct: 123 KSRGTIIGQLKRIGASCDWSREAFTMGGADGDPEKGNGPNFHDAVIKVFVDMYDKGLIYR 182

Query: 170 DKRLVNWDPQFQTAISDLEVEQKEVDGAYWHFAYPLADGVTYQHPIAFDEDGKATEFETR 229
            KRLVNWDP F+TAISDLEVE  E  G  WHF YPLA G TY++ +  D DG  T  ETR
Sbjct: 183 GKRLVNWDPHFETAISDLEVENIETPGHMWHFKYPLAGGETYEY-VEKDADGTVTLRETR 241

Query: 230 DYIVVATTRPETMLGDTGVAVHPDDERYKGLVGKFVTLPI----VGRRIPIVADDYADPT 285
           DYI +ATTRPETMLGD  VAVHP DERY  +VGK   +P+      R IPI+ D+Y DPT
Sbjct: 242 DYISIATTRPETMLGDGAVAVHPSDERYAPIVGKLCEIPVGPKEHRRLIPIITDEYPDPT 301

Query: 286 KGSGAVKITPAHDFNDFGVGKRAGLEAINILTVEAKLNDS-------------------- 325
            GSGAVKIT AHDFND+ V KR G+    ++  +A++ D                     
Sbjct: 302 FGSGAVKITGAHDFNDYQVAKRGGIPMYRLMDTKARMRDDGAPYAKAAAIAMEVAEGTRT 361

Query: 326 -----------VPAEYVGMDRFVARKAIV-----------------ARAEEEG------- 350
                      VP +  G+DRF ARKA+V                 A + EEG       
Sbjct: 362 LDEAEADSLNLVPDDLRGLDRFEARKAVVDQITAEGLAVMVPNPAAAASTEEGAAATEEV 421

Query: 351 --WLKEIEKTKHMVPHGDRSGVVIEPFLTDQWYVDAKTLAQPALKAVETGETIFEPKHWE 408
             +L  +E    M P GDRS VVIEP LTDQW+VDA+ +  PAL AV  G     P+  E
Sbjct: 422 PAFLPLVESKPIMQPFGDRSKVVIEPMLTDQWFVDAEQIVGPALDAVRNGTVKILPESGE 481

Query: 409 KTYFEWLRNIEPWCVSRQLWWGHRIPAWFGP 439
           KTY+ WL NIEPWC+SRQLWWGH+IP W+GP
Sbjct: 482 KTYYHWLDNIEPWCISRQLWWGHQIPVWYGP 512



 Score =  441 bits (1135), Expect = e-128
 Identities = 231/465 (49%), Positives = 298/465 (64%), Gaps = 7/465 (1%)

Query: 445  VEESEEAAYAAARAQFGAD-VQLTQDEDVLDTWFSSALWPFSTLGWPEKTSDLERFYPTS 503
            V+   +A  AA RA+   D + L QD DVLDTWFSS LWP  TLGWPE T +L +++PTS
Sbjct: 577  VDPMTDAVAAAQRAEAVPDAIPLVQDPDVLDTWFSSGLWPIGTLGWPEDTEELRKYFPTS 636

Query: 504  TLVTGFDIIFFWVARMMMMGIHFMGEAPFKQVFINALVRDEKGAKMSKSKGNVMDPLILI 563
            TLVTG DI+FFWVARMMMM +   GE PF++V+++ LVRD KG KMSKS GNV+DPL +I
Sbjct: 637  TLVTGQDILFFWVARMMMMQLAVTGEVPFREVYLHGLVRDAKGKKMSKSVGNVVDPLEII 696

Query: 564  DELGCDAVRFTLTAMSGQARDIKLSKQRIEGYRNFGTKLWNASRFAQMNE--CVRVEGFD 621
            DE G DA+RF+  AM+     +KL  QR++GYRNFGTKLWNA+RFA+MNE      +   
Sbjct: 697  DEYGADALRFSSAAMASLGGVLKLDLQRVQGYRNFGTKLWNATRFAEMNEVFTAHTQSAM 756

Query: 622  PSTVQQPINKWIRGETVKTVAEVTKALEAPSFDEAAGALYRFVWNVFCDWYLELAKPILN 681
            P    + +N+WI GET K    V  AL    F++AA ALY FVW   CDWY+E AKP+L 
Sbjct: 757  PPGCTETVNRWIIGETAKVREAVDTALAEYKFNDAANALYAFVWGKVCDWYVEFAKPLLL 816

Query: 682  GDDAAAKAETRATAAWALDVILKLLHPVMPFITEELWEKTAEFGPARETMLISAKWPELP 741
              D A KAETRA  AW LD    LLHP+MPFITEELW  T +    R+ ML+ A WP   
Sbjct: 817  DGDDATKAETRAVMAWVLDQCFILLHPIMPFITEELWGTTGQ----RDKMLVHADWPSYG 872

Query: 742  ADWIDAEAEAEIGWLVETVGEIRSIRAEMNVPPSAKPGLTIVGAGPETKARLARHRDLLL 801
            AD +DA+A+ E+ W++  +  +RS+RA+M VP      +  V      +   A +  L+ 
Sbjct: 873  ADLVDADADREMNWVISLIESVRSVRAQMRVPAGLYVPVVQVALDEAGQRAYANNETLIK 932

Query: 802  TLARLDAVREADAAPAGSAPVVMGEATGALGVAEFIDVAAEKARLTKDIAGHAGEIEKVN 861
             LAR++ + +AD AP G+  + +   T AL +A+ IDV+AEK RL K +A    ++  + 
Sbjct: 933  RLARIEGITKADTAPKGALTIPVEGGTFALPLADIIDVSAEKDRLGKTLAKLQKDLGGLR 992

Query: 862  KKLGNPDFLARAKEEVVEENRERLAEAEAAKAKLEAALSRLASVG 906
             +L N  F+A A  EVVEENRERLA  EA  A L AAL RL  VG
Sbjct: 993  GRLSNAKFVASAPAEVVEENRERLAAGEAELATLSAALERLEEVG 1037