Pairwise Alignments

Query, 762 a.a., NAD-dependent formate dehydrogenase alpha subunit from Caulobacter crescentus NA1000

Subject, 775 a.a., anaerobic (selenocysteine-containing) formate dehydrogenase from Herbaspirillum seropedicae SmR1

 Score =  863 bits (2230), Expect = 0.0
 Identities = 444/767 (57%), Positives = 538/767 (70%), Gaps = 15/767 (1%)

Query: 4   PKIPGVRDYDAPAGGWGALKAVAGALADQETVIEGG-KTLLRANQPEGFDCPGCAWPDPK 62
           P  P +  Y+ PAGGWGALK VA  L  +      G +TLL  NQP+GFDCPGCAWPD +
Sbjct: 2   PSKPRIEQYNQPAGGWGALKYVALNLVKEHVADGRGLRTLLSQNQPDGFDCPGCAWPDRE 61

Query: 63  HTSSFEFCENGAKAVAWEATTKRATPEVFARHTVSELLTWSDHQIEDLGRLTEPMAYDPA 122
           HTS+FEFCENG KAVA EAT KR TPE FA+HTV+EL+  SD ++E+ GRLT PM YD A
Sbjct: 62  HTSTFEFCENGVKAVAAEATKKRVTPEFFAQHTVTELMQQSDFELEEHGRLTHPMVYDAA 121

Query: 123 DDRYKAIPWDEAFSRAGAALKALSDPNQAEFYASGRASNEAAFLYQLLGRRFGTNNFPDC 182
            D+YK I W +AF+     L AL DP+ A+FY SGRASNEAAFL+QL  R++GTNNFPDC
Sbjct: 122 TDKYKKIEWADAFALMAKHLNALPDPDMADFYVSGRASNEAAFLFQLFVRQYGTNNFPDC 181

Query: 183 SNMCHEPTSVGLPDSIGLGKGSVTLEDFDHADLILCFGHNPGTNHPRMMATLREASRRGA 242
           SNMCHEPTSVGLP ++G+GKG+V LEDFDH D +L FG NP TNHPRMM  LR AS+RGA
Sbjct: 182 SNMCHEPTSVGLPGTVGIGKGTVLLEDFDHCDTLLLFGQNPATNHPRMMGELRHASKRGA 241

Query: 243 TILAFNPLKERSLERFASPQDAVEMATLGSTPIASAYYQVTIGGDAMLVQGMMKALLAME 302
           TI+A NPLKER LERFA PQ  VEM T+GST I+S +   T+GGD  L++G++K  + ++
Sbjct: 242 TIVAINPLKERGLERFADPQSKVEMLTMGSTRISSMFIHPTLGGDLALIKGVIKRTIELD 301

Query: 303 --AQGGG---VLDHAFIAEHTAGFEALMAQLEALDWSVIEAGSGLSRARIEEAAVVYAKS 357
             A+  G   V+D  FI EHTAGFE   AQ  A  W  I A SG+SR  IE+ A VY K 
Sbjct: 302 DAARAAGAERVIDVKFIEEHTAGFEEFAAQARAESWDDIVAESGVSREDIEKLAQVYVKG 361

Query: 358 KAAILCYGMGLTQHRDSSGTVQQLVNLLLLKGNIGRPGAGICPLRGHSNVQGARTVGVWE 417
           KA I  +GMGLTQH+ +  T+Q L N+++L+GNIGR GAG+CP+RGHSNVQG RTVG+ E
Sbjct: 362 KAVIATWGMGLTQHKHAVATIQLLSNMMMLRGNIGRQGAGLCPVRGHSNVQGDRTVGIDE 421

Query: 418 KPPAALLDSLRDVFGFEPPRVHGHTVVEAIAAMEQGRAKVFVGLGGNFAVAAPDPTRTFA 477
           KP  A LD L  VFGF+ PR HG+  V ++ AM +GR KVF+GLGGNFA+A PD  RTF 
Sbjct: 422 KPTPAFLDRLEQVFGFKAPRHHGNDTVGSVMAMLEGRTKVFIGLGGNFAMATPDTPRTFE 481

Query: 478 AMRQLDMAVHIATKPNRTHLLVGKAALLLPCLGRTEMDMRGGVRQSVTVEDSMSMVHASR 537
           AMR  ++ VHI TK NR+HL+ GK AL+LP +GRTE+DM+    Q VTVEDSMSMVH S 
Sbjct: 482 AMRSCNLTVHITTKLNRSHLVHGKDALILPTMGRTEIDMQKSGPQGVTVEDSMSMVHVSY 541

Query: 538 GLNPPASEHLLSEPAIVAGLAETVF---GRDPLIDWGGLANDYDAVRALIAGVFPSAFAD 594
           G+N PASEHL+SE AIVA LAE         P IDW   A DY  +R  I  V+  AF  
Sbjct: 542 GINKPASEHLMSETAIVAHLAEATMKSRNNGPKIDWLWYAEDYSRIRDAIEQVY-DAFKG 600

Query: 595 YNDRVRVPGGFRLPVGPSDRVWRTASGKANFLVFD-PKGGDPRRG----DPDVLLLTTLR 649
           YN+R+  PGGF L V   DRVW+TASGKANF+V D PK     R        +L L T R
Sbjct: 601 YNERIANPGGFHLGVASRDRVWKTASGKANFIVHDIPKDTPIHRARAIHGEKLLTLMTTR 660

Query: 650 SHDQYNTTVYGQDDRYRGVFGRRDVVFANPDDMARLGLEAGAKVDLLAAFDDGGARIARG 709
           SHDQYNTT+YG DDRYRGVFG+R VVF NP D+  LGL+ G  VD+ + +DDG  R A G
Sbjct: 661 SHDQYNTTIYGMDDRYRGVFGQRRVVFINPADLQMLGLKDGEWVDITSVWDDGVERRAEG 720

Query: 710 FTLVARDIPPGCLAAYYPETNVVIALDDHDLRSGTPAYKSAPVRLRK 756
           F LV  +IP GC+ +YYPETN ++ L+    ++ TP  KS PV L +
Sbjct: 721 FLLVEYEIPRGCIGSYYPETNPLVPLESFADKARTPTSKSIPVLLSR 767