Pairwise Alignments

Query, 762 a.a., NAD-dependent formate dehydrogenase alpha subunit from Caulobacter crescentus NA1000

Subject, 773 a.a., formate dehydrogenase from Herbaspirillum seropedicae SmR1

 Score =  691 bits (1782), Expect = 0.0
 Identities = 364/753 (48%), Positives = 468/753 (62%), Gaps = 12/753 (1%)

Query: 11  DYDAPAGGWGALKAVAGALADQETVIEGGKTLLRANQPEGFDCPGCAWPDPKHTSSFEFC 70
           +Y+  AGGWG++KA+   L  +  +  G + L+  N+PEGF C  C+W  P     FEFC
Sbjct: 14  EYNNAAGGWGSVKALGSILQQEHVIASGTRILMHQNKPEGFACVSCSWAKPADPHLFEFC 73

Query: 71  ENGAKAVAWEATTKRATPEVFARHTVSELLTWSDHQIEDLGRLTEPMAYDPADDRYKAIP 130
           ENGAKA AWE T KRAT   FA+HTV+E+  W+D ++E  GR+TEPM YD A DRY  + 
Sbjct: 74  ENGAKATAWEITRKRATAAFFAQHTVTEMEAWNDLELESSGRVTEPMKYDAASDRYLPVS 133

Query: 131 WDEAFSRAGAALKALSDPNQAEFYASGRASNEAAFLYQLLGRRFGTNNFPDCSNMCHEPT 190
           W EAF    A L+A+ DP +  FYASGRAS E ++LYQL+ R +GTNN PD SNMCHE T
Sbjct: 134 WSEAFDDIAAQLRAM-DPKKVVFYASGRASLETSYLYQLMARMYGTNNLPDSSNMCHEST 192

Query: 191 SVGLPDSIGLGKGSVTLEDFDHADLILCFGHNPGTNHPRMMATLREASRRGATILAFNPL 250
           SV LP +IG+  G+VTL+DF   D IL FGHN GTN PRM+  L E  +RG  ++ FNPL
Sbjct: 193 SVALPQTIGVPVGTVTLDDFGQTDCILFFGHNTGTNAPRMLHPLEEVRKRGVPVITFNPL 252

Query: 251 KERSLERFASPQDAVEMATLGSTPIASAYYQVTIGGDAMLVQGMMKALLAME--AQGGGV 308
           +ER LERF +PQ   EM T   T I++ Y Q+ IGGD+    GM K +L  +  A+  G+
Sbjct: 253 RERGLERFVNPQSPKEMVTPAHTDISTQYLQIKIGGDSAAAIGMAKRILERDDKARQEGL 312

Query: 309 ---LDHAFIAEHTAGFEALMAQLEALDWSVIEAGSGLSRARIEEAAVVYAKSKAAILCYG 365
              LD AFI EHT+GFE     + A  W  +E  +G+SRA +E AA  YA +  A+L YG
Sbjct: 313 PRLLDLAFIEEHTSGFEQFADAVRAAPWDELERHAGVSRAELELAADTYAGAGRAMLMYG 372

Query: 366 MGLTQHRDSSGTVQQLVNLLLLKGNIGRPGAGICPLRGHSNVQGARTVGVWEKPPAALLD 425
           MG+TQHR++  T+  L NLLL++GNIG+PGAGICP+RGHSNVQG RTVG+ EKP     D
Sbjct: 373 MGVTQHREAVRTIHMLTNLLLMRGNIGKPGAGICPIRGHSNVQGQRTVGITEKPELVPND 432

Query: 426 SLRDVFGFEPPRVHGHTVVEAIAAMEQGRAKVFVGLGGNFAVAAPDPTRTFAAMRQLDMA 485
            LR ++ FEPP   G   VEA   +  G    F  LGGNF  A PD     AA R+L + 
Sbjct: 433 KLRALYHFEPPMEKGLNTVEACEKIRDGELSAFFMLGGNFVRAIPDHGVMEAAWRKLPLT 492

Query: 486 VHIATKPNRTHLLVGKAALLLPCLGRTEMDMRGGVRQSVTVEDSMSMVHASRGLNPPASE 545
           V + T  NR+ ++ G+ + +LPCLGR E+D + G  Q+V+VEDS   +H SRG   PAS 
Sbjct: 493 VQVVTHFNRSCVIHGQTSYVLPCLGRIEIDRQRGGEQAVSVEDSTGCMHGSRGRAEPASP 552

Query: 546 HLLSEPAIVAGLAETVFGRDPLIDWGGLANDYDAVRALIAGVFPSAFADYNDRVRVPGGF 605
           HLLSEPAIVA LA+ +   +P +DW G   DY  +R  I   +P  F D+N R+  PGGF
Sbjct: 553 HLLSEPAIVAELAKRLLPFNPQVDWDGWVGDYARIRDAIEATYPDIFRDFNARMWNPGGF 612

Query: 606 RLPVGPSDRVWRTASGKANFLVFDPKGGDP---RRGD-PDVLLLTTLRSHDQYNTTVYGQ 661
             P+   +R W+T +G+ANF+   P G DP     GD P+VL L T R   Q+NTTVY  
Sbjct: 613 ARPLAARERQWKTPNGRANFMT--PDGFDPDPDMPGDAPEVLRLMTTRGDSQFNTTVYSL 670

Query: 662 DDRYRGVFGRRDVVFANPDDMARLGLEAGAKVDLLAAFDDGGARIARGFTLVARDIPPGC 721
           DDR+RGV+G R V+  N  D+ + GL AG  V       DG  R      +   DIP GC
Sbjct: 671 DDRFRGVWGTRRVLLMNLRDLQQHGLAAGDFVCAETVSADGVERRVPHLRVEPFDIPVGC 730

Query: 722 LAAYYPETNVVIALDDHDLRSGTPAYKSAPVRL 754
           +  Y+PE N +I L  H   S  PA KS P+RL
Sbjct: 731 VMGYFPELNRLIPLFHHARGSKVPAAKSVPIRL 763