Pairwise Alignments

Query, 393 a.a., two-component sensor histidine kinase from Caulobacter crescentus NA1000

Subject, 359 a.a., sensor histidine kinase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  127 bits (319), Expect = 5e-34
 Identities = 90/349 (25%), Positives = 169/349 (48%), Gaps = 6/349 (1%)

Query: 41  QRWHLIWLIYIPFYFLSWIYRKPGLLEVMASLGGVCFFFFLYWRLWRQRGKAELWQVLAV 100
           Q+   ++LI + FY +          +++  L  +  F + Y+  +R   ++    ++A+
Sbjct: 10  QKLAWVYLINLVFYLIPLFITPYSSWQIILILAVLVPFIYCYFWTYRCNFRSAYRPIIAM 69

Query: 101 FCIGLALSRFNVGWSVYTIYAMSFAARMPSRQMAVRTMIALELVLIALGPVLQPHGLSAW 160
             +   ++  N G      +A  F       +++V     + ++L  L  + Q + L   
Sbjct: 70  LVLATVVTPINPGSISLFTFASFFIGFFYPIRVSVFCWFGVVVLLFLLNYLNQFNNLYFP 129

Query: 161 ASGVIFGAVVGFASLMQGDMERKNEALAIAH--EEVRALAATAERERISRDLHDLLGHTL 218
             G +   V+G   L   +  R +  L      +E+  LA   ERERI+RDLHD++GH+L
Sbjct: 130 LYGTLL--VLGVGMLGVAERRRYHHKLKEQQSAQEISTLATMVERERIARDLHDIMGHSL 187

Query: 219 TLVAVKAELAARLVSR-DASAAEREMQAVAAAAREALSEVRTAVVGMKGASLAGELDRVR 277
           + +A+KAELA +L+++ +   A  ++Q +   ARE+LS++R  V   K   LA  + ++ 
Sbjct: 188 SSIALKAELAEKLLAKQEYQLATTQLQELGQIARESLSQIRHTVCDYKHKGLASCITQLC 247

Query: 278 QALAAAGVEADVSALTTDGHPGQEAVLAMALREGVTNVIRHAGASRCDISLTPSASALVL 337
            +L   G+  ++           E+ L + L E V N++RH+ AS+C I+     + L +
Sbjct: 248 HSLRDKGIYVELIGELPKLPARAESQLGLILTELVNNILRHSSASQCSITFREQENTLFV 307

Query: 338 TITDNGQGGRLVEGSGLKGMRARLAAIGGTLDVKSDKAGTRLVATAPLR 386
            + DN      +EG+GL G+R RL ++GG      ++ G     + PL+
Sbjct: 308 EVKDNASASPFIEGNGLTGIRERLDSLGGHFSYNLEQ-GYAFTVSLPLQ 355