Pairwise Alignments

Query, 411 a.a., transporter, major facilitator superfamily from Caulobacter crescentus NA1000

Subject, 391 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  113 bits (282), Expect = 1e-29
 Identities = 93/365 (25%), Positives = 165/365 (45%), Gaps = 25/365 (6%)

Query: 18  LTYLMFMMFAMTTDSVGVIIPHVIKTFDLGMAAAGSFHYASMTGIALGGVCLGFLADRLG 77
           + +  F+   +   S+GV++P ++  + L  A       + + G  L  +    +  RLG
Sbjct: 17  IAFYAFISIGLAEASLGVLLPSILAEYGLTSATITLLFISQICGYILAAIASSLVMARLG 76

Query: 78  RKATIVLGLVAFAVTAFLFAVGKDFGFFVALLFLSGLAIGVFKTGALALIGDISSSTRAH 137
               +VL          ++A+   +   V    L G+ IG+   G    +  +     AH
Sbjct: 77  LGRLLVLAASLLTAALLIYALVPAWLLMVLAGPLLGMGIGLIDAGINTTL--VQDDRTAH 134

Query: 138 TATMNMVEGFFGLGAILGPAIVTALLAQGASWKWLYVIAGALCVLL---IIAALNVRYP- 193
              +  + GF+G+GA  GPAI T LLA G  W+ +Y +   L  LL   ++AAL  RYP 
Sbjct: 135 L--LGALHGFYGIGAFAGPAIATTLLALGLEWRQVYSVLAMLTSLLLVGVLAALFYRYPP 192

Query: 194 --QTPPAAQQKLDPRVTLAMFGNPYALAFSFAIMLYVGVETAIYVWMPTLLADYKGPAVL 251
             + P       D ++  ++   P    F   +++YVG+E ++  W  ++    +    L
Sbjct: 193 LLKNPDLLAASADVQLRRSL-RTPIVFLFGAFLLIYVGIEASVSHWAYSVQTIARATPAL 251

Query: 252 LAAYALSVFFILRAAGRFLGAWLLNRLSWTQVVAICSVAILICFAAALAG--GRAVAVYS 309
            A Y LS +++   AGRFL ++ L  L   + + + S+ +L+     L G   +  ++ S
Sbjct: 252 WAGYGLSAYWLGLTAGRFLLSYSLRSLGGLRTITL-SLGLLM---VGLIGWWQQPQSLIS 307

Query: 310 LPISGLFMSVLYPTINSKGISCFPK-AEHGSVSGVILFFTCVSAV---IAPWMMGLISDR 365
           LP+ G  ++ ++PTI    I   PK    G V   + F T  ++V   + P  +G ++  
Sbjct: 308 LPLIGFALAAIFPTI----IWLIPKRLPEGLVPATVGFATSAASVGSALIPAGIGWVASG 363

Query: 366 FGDAV 370
            G AV
Sbjct: 364 AGLAV 368