Pairwise Alignments

Query, 411 a.a., transporter, major facilitator superfamily from Caulobacter crescentus NA1000

Subject, 504 a.a., Arabinose efflux permease from Sphingomonas koreensis DSMZ 15582

 Score = 75.9 bits (185), Expect = 3e-18
 Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 20/278 (7%)

Query: 14  LIRILTYLMFMMFAMTTDSVGVIIPHVIKTFD---LGMAAAGSFHYASMTGIALGGVCLG 70
           L  + T L  +MF +   SV VI+P++ +       G+    + +  + T + +     G
Sbjct: 11  LALLATCLGALMFGLEITSVPVILPNLERALHGDFQGLQWVMNAYTLACTTVLMA---TG 67

Query: 71  FLADRLGRKATIVLGLVAFAVTAFLFAVGKDFGFFVALLFLSGLAIGVFKTGALALIGDI 130
            LADR GRK   ++ + AF  T+ L  +       +A  FL GLA G     ++AL+   
Sbjct: 68  TLADRFGRKRVFMISVAAFGATSVLCGLADSMALLIAGRFLQGLAGGAMLICSIALLSHQ 127

Query: 131 SSSTRAHTATMNMVEGFFGLGAILGPAIVTALLAQGASWKWLYVIAGALCVL-LIIAALN 189
               R  +          G+G   GP + +A++A    W+W++++   + VL L IAA  
Sbjct: 128 FQDARDRSRAFAAWGVVSGIGLGFGPLVGSAIIAL-TGWEWIFLVHAPIAVLTLAIAASA 186

Query: 190 VRYPQTPPAAQQKLD----PRVTLAMFGNPYALAFSFAIMLYVGVETA---IYVWMPTLL 242
           +   + P A  ++LD      ++LA+FG  Y +    A+ L   V  A   I+ ++  L+
Sbjct: 187 ITESRDPEA--KRLDVAGIATLSLAVFGLVYVITQGAALGLTASVAIAAATIFCFVVFLV 244

Query: 243 ADYKGPAVLLAAYALSVFFILRAAGRFLGAWLLNRLSW 280
           A+ +    +   +  SVF     +G  LG   +N   W
Sbjct: 245 AERRQAHPM---FDFSVFRNRSFSGAILGCIAMNTSYW 279