Pairwise Alignments

Query, 881 a.a., TonB-dependent receptor from Caulobacter crescentus NA1000

Subject, 942 a.a., TonB-dependent receptor, plug (RefSeq) from Shewanella loihica PV-4

 Score =  151 bits (381), Expect = 2e-40
 Identities = 216/936 (23%), Positives = 361/936 (38%), Gaps = 130/936 (13%)

Query: 41  APMVALAQDATTVDAVVITGQREAQRAAIVVKREAFVVSDVVSADDIGKLPDHNTAAALR 100
           A   A  QD + ++ + + G R +   ++  KR A  VS+ +SADD+G LPD + A AL 
Sbjct: 32  AEAAATTQDES-IEVIEVRGFRTSVIKSLNNKRFADTVSETISADDLGALPDQSIADALT 90

Query: 101 RIPGISVMEDQGEPRFPVIRGLRSTYNRTTIDGALVASVDESG-RTVPMDIVPSVMAGRL 159
           R+PG++ +   G+     IRGL   +   T++G     V   G R +  D  PS +  + 
Sbjct: 91  RLPGVTAVRTGGQASGLNIRGLDGDFVAATLNGR--EQVTTGGKRAIEFDQYPSELINQA 148

Query: 160 EVIKTVTPENDGNAIGGVINVTTRSAFDAKRPFFNGMASYGQY-ERSGDVRN-DKPSYRL 217
           +V K+         + G + + T     A +     + + G + +R+G++ + ++   RL
Sbjct: 149 QVYKSPKASLIEGGVAGTVELKTADPLQAPKDHNFTVNARGSFNDRAGEIADAEEYGNRL 208

Query: 218 AFAAGRTFGAEDQWGVVIGASHEQLDYDIPQVEAADPSVREYTAAGAPVLSGSPTGNGLQ 277
           +F+    F  ++  GV +G +H    Y   Q      +       G   L     G  +Q
Sbjct: 209 SFSYQGKF-LDETLGVAVGYAHLYQPYVASQFIGLRFNDDRRDVNGDGNLESISEGFEMQ 267

Query: 278 VPTQVRLFWYNNTKQRSGVNAKLEYRPSDAFRWDASVLASRMEDDEERIEYRIEPLGN-- 335
                       T  R G    + ++P+D + +   +  S+ + +     +R++ L N  
Sbjct: 268 QK--------GGTDTRDGYMGAIHWQPNDNWSFKGDIFHSKFDSENFARGFRVKSLKNGQ 319

Query: 336 -----------VANQTPTSGAFTRGRGIIHLNQPITTREIGLARTGFAWSFAPNWKLDGD 384
                      +     T G       +++ N      E+        W+   N  +  D
Sbjct: 320 ISDAIVEDGSMIGGTVSTDGTDNFAVFVVNDNDS-KYSELTSGAVNIEWTNGENLTIAAD 378

Query: 385 LVYSLAGLKVPNHSVEFRTVDAQGANYAFTYDTT---NRLFPT-------FNPVNEAALR 434
           + YS A  +  N        D    N       T   N L P        +   +   LR
Sbjct: 379 ISYSSADGEFVNGGTRAVIYDDMANNVRSAESITYKLNNLNPADISFAKDYTDTSTLGLR 438

Query: 435 NPANYVLQQHRDALTKTNESTTQARLDLAFDDDAHWKLKFGGVLRSSERDFRNSQVNYRA 494
               +   Q  D +          +LDL +  D  +       +R SER+F N+Q   +A
Sbjct: 439 EVGMWPYDQQNDLIA--------YKLDLNYQLDNSFVSSIDVGVRYSEREF-NAQ-RSQA 488

Query: 495 ATGFVY--------TLAEVDKAGPSQLIAGRYRLDP---RIDAEAATAFFRANRGRFTTT 543
             GF +         LA  D         G     P    ID + A     A        
Sbjct: 489 GYGFEFGTNPDNQPVLALTDDMTRVVNFGGELSGYPSFLAIDFDKAVDLVNAQLAATGQD 548

Query: 544 VSAPTGNY----------DVSEDVQAGYAQAS--YQFGDLTLLG--GLRYERTKVTSDAV 589
              PT N+           V+EDV AGY QA+  ++ G + + G  GLR   T  +S  +
Sbjct: 549 PFVPTANWANNWTMIQSGTVNEDVLAGYVQANLDFEIGSIPVTGNIGLRVVNTDQSSTGL 608

Query: 590 RNTGGVLTP--------VSND-------GSYANWLPSLHLQWKPRPDLIVRAAWTNTIGR 634
           +  G  L          VS D        SY ++LPS++L +    +  +R A  + + R
Sbjct: 609 QQVGFGLGEEIVDEKGVVSTDYIHNKVGKSYTDYLPSVNLNFHLTQNDQIRFAAASVMAR 668

Query: 635 PDYGSLAATENLNFDGS-QPTLSRGN------PDLKARESESFDLSVEFY--PTDGMVSL 685
           P    L +     +D S  P   + N      P L    ++ +DLS E Y   ++G +  
Sbjct: 669 PPIDKLKSGMGSWYDDSATPGYKKYNAWGNTSPLLDPFYADQYDLSYEHYFEESEGAIVF 728

Query: 686 AVFSKDIKNEI--FTLSSSERLDVG---------RGVETVLISTPRNAETA-------KI 727
           AVF KDIK+ I  FT+   +  + G          GVE  ++      +TA        I
Sbjct: 729 AVFYKDIKSFINNFTIQPFDFEEAGFIVPDTIVDNGVEFPVVKNEGQYQTAVNNDNGGYI 788

Query: 728 KGVEFAVQQAFTFLPAPLDGFGFNGNVTWLDTEFTFRT-----STGPRVTGLFQQPEITT 782
           +G+E A  Q F FLP  L G GF G+  + D+E  F T     S    + GL    E   
Sbjct: 789 RGIELAYTQVFDFLPGALSGLGFTGSYAYSDSEVEFETDLSGESLAIPLPGL---SEHVL 845

Query: 783 NAAVYYQRGPFEARVSHNYIGGQLETINDANVNSDQ--YWKGRHVFDASLSWRWNKHLSL 840
           N  ++Y    F+ R+S  Y   + E +++      Q  ++    + D   S+  +  L  
Sbjct: 846 NTTLFYTLDGFDTRLSMRY---RSEYVSEQVAVESQLAFFDAETILDYQASYAMDNGLKF 902

Query: 841 FVEGQNLSNTGRQEVTGPGRRYLQEWANYGRTYWVG 876
             +  NL++   +   G   +      ++GR Y++G
Sbjct: 903 LFQVNNLTDEANKTYFGQTHQ-TGTIQSFGRQYFLG 937