Pairwise Alignments

Query, 550 a.a., transporter, major facilitator superfamily from Caulobacter crescentus NA1000

Subject, 459 a.a., L-Proline/Glycine betaine transporter ProP from Pseudomonas fluorescens FW300-N1B4

 Score =  219 bits (557), Expect = 2e-61
 Identities = 123/318 (38%), Positives = 179/318 (56%), Gaps = 4/318 (1%)

Query: 17  VVGASSLGTVFEWYDFYLYGSLAPIITSH-FFSGVNETTGFILALLAFAAGFAIRPLGAL 75
           V  AS +GT  EWYD +++ + + ++ +  FF   +   G +LA   FA+ +  R +GA 
Sbjct: 23  VAVASVIGTTVEWYDLFVFATASALVFNKVFFPDFDPLIGTLLAFGTFASAYLARIVGAA 82

Query: 76  IFGRLGDLWGRKNTFLITMLLMGVSTFVVGLLPSYAQIGVAAPIALVLMRLVQGLALGGE 135
           +FG  GD  GRK+  L+++L MG +TF +GLLP+YA IG+ API L+L+R++QGLALGGE
Sbjct: 83  LFGHFGDRLGRKSMLLVSLLTMGAATFAIGLLPNYAAIGIWAPILLLLLRVIQGLALGGE 142

Query: 136 YGGAATYVAEHAPPGKRGFYTSWIQTTATIGLFLSLAVILVARIQLGEEAFKAWGWRIPF 195
           +GGA     EHAP  KRG Y SW+Q     G  ++    LV    L  E   AWGWRIPF
Sbjct: 143 WGGAVLMAVEHAPANKRGLYGSWVQIGVPAGTMIANLAFLVIAAWLSPEDLLAWGWRIPF 202

Query: 196 LVSLLLLGVSLWIRLKLHESPTFERMIAEGKGSKKPLTEAFGNWPNLKIVLLALVGLTMG 255
           L S+LL+ V L+IRL + E+P F ++       K PL E F  +   K V+L  +  TM 
Sbjct: 203 LASVLLIAVGLYIRLNISETPAFNKVKEAEVQVKMPLAEVFRKY--WKQVVLGGIA-TMS 259

Query: 256 QAVVWYTGQFYALFFLEKTLKLDGALANTLVAVALLIGTPFFVICGWLSDKIGRKPIIIL 315
               +     + L +  + L    ++   +V ++         + G LSD+ GRKPII+ 
Sbjct: 260 TGASFNIIVAFGLTYGTQNLGFSRSVMLGVVLLSCAWCIVMLPVFGALSDRYGRKPIIVA 319

Query: 316 GCLLAALTYFPIFKAITT 333
           G +  AL  FP+F  + T
Sbjct: 320 GIVAEALVAFPMFWLMDT 337



 Score = 55.1 bits (131), Expect = 6e-12
 Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 2/90 (2%)

Query: 454 VIGLLALLVIYVTMVYGPIAAMLVELFPTRIRYTAMSLPYHIGNGWFGGFLPTTAFAIVA 513
           + G L L+  +    YGPIA  L ELF TR+RY+ +S+ Y +         P    A++A
Sbjct: 344 IFGYLLLMTAFAAN-YGPIATFLAELFGTRVRYSGLSISYMLSGLLGSAATPIVTTALLA 402

Query: 514 ATGDIYSGLWYPVIIAAITAVVGGLFLKDT 543
           ATG   S  WY +I AA  ++V  L L +T
Sbjct: 403 ATGKGSSVAWY-MIGAAFISLVALLLLTET 431