Pairwise Alignments

Query, 550 a.a., transporter, major facilitator superfamily from Caulobacter crescentus NA1000

Subject, 500 a.a., proline/betaine transporter from Klebsiella michiganensis M5al

 Score =  214 bits (544), Expect = 8e-60
 Identities = 120/327 (36%), Positives = 185/327 (56%), Gaps = 16/327 (4%)

Query: 18  VGASSLGTVFEWYDFYLYGSLAPIITSHFFSGVNETTGFILALLAFAAGFAIRPLGALIF 77
           + A+SLG   EW+DF +YG +A  +   FF   N +   I AL  F+  F IRPLG L F
Sbjct: 27  ITAASLGNAMEWFDFGVYGFVAYALGKVFFPDANPSVQMIAALGTFSVPFLIRPLGGLFF 86

Query: 78  GRLGDLWGRKNTFLITMLLMGVSTFVVGLLPSYAQIGVAAPIALVLMRLVQGLALGGEYG 137
           G LGD +GR+    IT+++M +STF +GL+PSYA IG+ API L+L ++ QG ++GGEY 
Sbjct: 87  GMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYT 146

Query: 138 GAATYVAEHAPPGKRGFYTSWIQTTATIGLFLSLAVILVARIQLGEEAFKAWGWRIPFLV 197
           GA+ +VAE++P  KRGF  SW+   +  G  +   V+++    +GEE F +WGWRIPF +
Sbjct: 147 GASIFVAEYSPDRKRGFMGSWLDFGSIAGFVMGAGVVVLISSVVGEENFLSWGWRIPFFL 206

Query: 198 SLLLLGVSLWIRLKLHESPTFERMIAE-GKGSKKPLTE---------AFGNWPNLKIVLL 247
           +L L  + L++R  L E+P F++ + +  +G ++ L E         A  +W +    LL
Sbjct: 207 ALPLGIIGLYLRHALEETPAFQQHVDKMEQGDREGLQEGPKVSFKEIATKHWRS----LL 262

Query: 248 ALVGLTMGQAVVWYTGQFYALFFLEKTLKLDGALANTLVAVALLIGTPFF-VICGWLSDK 306
             +GL +   V +Y    Y   +L   L         L+ +A+++G  F   + G LSD+
Sbjct: 263 TCIGLVISTNVTYYMLLTYMPSYLSHNLHYSED-HGVLIIIAIMVGMLFVQPVIGMLSDR 321

Query: 307 IGRKPIIILGCLLAALTYFPIFKAITT 333
            GR+P I++G +       P F  I +
Sbjct: 322 FGRRPFILIGSVALFALSIPAFIMINS 348



 Score = 46.2 bits (108), Expect = 3e-09
 Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 3/94 (3%)

Query: 456 GLLALLVIYVTMVYGPIAAMLVELFPTRIRYTAMSLPYHIGNGWFGGFLPTTAFAIVAAT 515
           GLL L V+    + G +A+ L  +FPT IR++A++  ++I +    G  PT A  +V +T
Sbjct: 357 GLLVLAVVLNCFI-GVMASSLPAMFPTHIRFSALASAFNI-SVLIAGLTPTLAAWLVEST 414

Query: 516 GDIYSGLWYPVIIAAITAVVGGLFLKDTRHNRLE 549
            ++    +Y ++IA I  ++ GL +K+T +  L+
Sbjct: 415 QNLMMPAYYLMVIAVI-GLITGLSMKETANRPLK 447