Pairwise Alignments

Query, 591 a.a., flagellar hook protein FlgE from Caulobacter crescentus NA1000

Subject, 598 a.a., flagellar hook-basal body complex protein from Rhodopseudomonas palustris CGA009

 Score =  192 bits (489), Expect = 3e-53
 Identities = 179/631 (28%), Positives = 278/631 (44%), Gaps = 73/631 (11%)

Query: 1   MSINSAMLAGVSGLIANSSALAAISDNIANVNTVGFKRSTSNFSTLVTSGNKNQTYSAGG 60
           M I  A+   V+GL +NS AL  IS NIAN  T  FKR  ++F  L+     NQ   AG 
Sbjct: 1   MGIFGALTTSVAGLRSNSYALENISGNIANSQTTAFKRIDTSFLDLIPQAGNNQQL-AGS 59

Query: 61  VKAQTHQFISQQGLTQSTTSNLDISISGAGFFVTTEKPENLTATD-----TRSFTRAGSF 115
           V A +    + QG  QS + +  ++I+G GFFV  +KP + +  +       +FTR G F
Sbjct: 60  VTAGSRLTNTTQGSVQSASVSTYMAINGEGFFVV-QKPSSFSDNNPIFPGVDNFTRRGDF 118

Query: 116 QLDNLGYLRNDAGLYLQGWLADPVSGLITPDPSDLMQLASINVGSVGGTAEKTTRVGVNA 175
            LD  GYL N AG YL+G   DP +G        +++  +  + S     + TT++   A
Sbjct: 119 SLDKNGYLVNGAGYYLEGVKIDPTTGNPVGGSPGVLKFQNDFLPS-----QATTKISYRA 173

Query: 176 NLRSEQPVAAAVSYKVGTAGSPSKTNVVDSATNSHNYDVVYSSTGIANPVSGNNEYLVDI 235
           NL S         +     GS       D ATN      V  +T    P S N++  + I
Sbjct: 174 NLAS---YPLTTKHDKSIPGS-ELLRAADFATNPQ----VLGTT--PPPFSDNSKTGLQI 223

Query: 236 KENGVIVATGKVAYDAATNELVSSTIDYKGASPVTGSMTTTRINAAGTTVN--------- 286
                +  TG            S  +D+   + +T + T     A+G T +         
Sbjct: 224 NNKQGVPITGATKLSGVAGS-DSIGVDFAVGNTITVNGTAITFTASGGTDDATHIPIDST 282

Query: 287 ----LADLGIVNASGADDAEVVAGKLYDPSTWSMSDYAKDNSKGVKPDFEVQIPLSDSKG 342
               L+ +  ++A GA  A  V        T   SD A  +         +  P++  + 
Sbjct: 283 IANLLSKIDAISAGGA--ASTVTSGAVVLHTGVASDLAMTSGAAAFASLGLTSPVNVVRN 340

Query: 343 GQRTVTLSMLKGPGPNQWYAELRAKPGDLANNGNGQ-ISTGIIEFTTDGKLKNTG----- 396
           G  +V    + G     +  E  +     A +GNG  ++        D     TG     
Sbjct: 341 GGGSVGTGKVTGVDNQTFLDESVSGGSTTAYDGNGAPVNVQFRWAKVDSATLGTGHTDVW 400

Query: 397 SLFGTTSPTA-------------ITIKSSGYIAPTVTPPAVQPPTPPTWADALGIDEQEV 443
           +LF   +P A              T  S+G ++P +    +      T     G+   +V
Sbjct: 401 NLFYQVNPNATGTQTAWQNVNTNFTFASNGQMSPVIGQITL------TGLTVSGVSLGDV 454

Query: 444 QIDLASAAGGLTQY---NSQSVVQSVNTNGTAFGNLTNIEIDEGGYVSAIFDNGVTRRIA 500
              +A   GGLTQ+   N    V  +  +G + G L ++ +   G V   + NG    +A
Sbjct: 455 T--MAFGTGGLTQFSDTNGNVQVNQLQQDGYSAGQLVSVSVSNDGRVVGAYSNGRNIDLA 512

Query: 501 QVAIATFSNPNGLKGVNGNAYRVTNESGTYSLKAPSQGGAGALAPSTLEASTVDLSQEFT 560
           +V++ATF+  N LK  +G A+ +TNESG      P  G  G+++ S+LE+S  D++ EFT
Sbjct: 513 EVSVATFNGANFLKRTDGGAFEITNESGQ-----PLYGKGGSVSGSSLESSNTDIADEFT 567

Query: 561 GLITTQRAYSASSKIITTADQMLEELLNIKR 591
            LI TQ+AYSA++K+ITTA+ M+++LLN+ R
Sbjct: 568 KLIVTQQAYSANTKVITTANTMVQDLLNVMR 598