Pairwise Alignments

Query, 703 a.a., flagellar hook-associated protein FlaN from Caulobacter crescentus NA1000

Subject, 638 a.a., flagellar hook-associated protein FlgK (RefSeq) from Shewanella loihica PV-4

 Score =  119 bits (298), Expect = 5e-31
 Identities = 166/708 (23%), Positives = 281/708 (39%), Gaps = 94/708 (13%)

Query: 6   IMSTATSGMMAAQTGLRVTSDNIANVNTTGYVRKTVSQSNLLSNGM-----GVGVNIDAI 60
           +++ A +G++A+Q+ L VTS+NI N NT GY R+   QS+L S  +     G G  I  +
Sbjct: 5   LLNIARTGVLASQSQLAVTSNNITNANTQGYHRQVAEQSSLESQRLGNSFYGAGTYITDV 64

Query: 61  KRATDQFLQSASLNAASESGRASIVASTLNSAQQLFGDPSGETSFFTVLDDVYAAFSSAQ 120
           KR  +++         +   +A    + ++   QLF            L+D++A  +S  
Sbjct: 65  KRIYNEYAARELRIGQTALSQAQTTQTKMSELDQLFSQIGKAVP--QSLNDLFAGLNSLA 122

Query: 121 DDPSSSLLRTQALTRLDDFLSGSSRITASLSKLGKDADTRIAADVGRVNDLLSQIDALNT 180
           D P    +R   L   D      +++ + L    K  + +I+A   R+N++ +++  +N 
Sbjct: 123 DLPDDMGIRGSLLGNADQIAKALNQMQSQLDGQMKQTNDQISAMTDRINEISTELGHINQ 182

Query: 181 DITRAKVAGADATGAENVQSSLVDELSKLMNVQISPRTLGG-IVVRSTEGLNLAGDGAAK 239
           ++ +++  GAD    +  Q +L+ ELS+   V + P   G   ++     + ++G+ + +
Sbjct: 183 ELMKSQ--GADMQLLDK-QDALIQELSEYAQVNVIPLESGAKSIMLGGAVMLVSGEVSMQ 239

Query: 240 VTYQTSATATGFLTVQLANGSD-YPVPLNISSGEIRGLMDVRNIDLVNLSDQLGEFTSRA 298
           +   T     G L +    G+    V  +   G +  L   R+  L+    ++G+     
Sbjct: 240 MGATTGDPYPGELRITTTAGNQTLVVDPSKMGGSLGALFQFRDETLIPAQLEMGQLALGI 299

Query: 299 TEEINRAANAASSVPAPTSLTGRNTGLDAQ--AALTGFTGKTTIALTNASGVIQRRIDID 356
            +  N+A +    +       G +  LD    A   G  G    A  N +G    R++ID
Sbjct: 300 ADSFNQAQSQGFDL---NGEVGSDLFLDINDPAMSVGRAG----AYGNNTGNAALRVNID 352

Query: 357 FDAGTMTVNGAAGPAFTPANFLAQLNTALGGQGAAGFSNGALSING---VGGLGVAIADD 413
                  VN  +G ++    F A     L  Q     +   L++NG    GG G +I  D
Sbjct: 353 ------DVNALSGGSY-ELTFTAPATYELRDQETGTVT--PLTLNGSQLTGGDGFSINID 403

Query: 414 ATTPSSKTGKGFSHYFGLNDIVRTSGYSPYETGLTSADLHGFTTGQMTIRLTDVEGGRIR 473
           +   +S  G  F       +I  TSG                    + + +TD +G    
Sbjct: 404 SGAMAS--GDRF-------EIRPTSG----------------AAAGIKVVMTDPKGIAAA 438

Query: 474 DIPFTPPL---GGTMQNMIDALNSRASGVGLYGQFSMNAKGQVSFTSNTNTPVTMSIVAD 530
               T      G T   ++   N   +   L G            T   +T      V D
Sbjct: 439 APKITQDAANSGNTQVKLVSIDNRSVANFPLTGS---------ELTFEIDTTANTFEVFD 489

Query: 531 STERGAGGPSASQLFGIGPAERSTRGEKFFLNTAMDQNPKLLPFAKLDLTQAVGGNAALA 590
           +     G P+A       P   S  G  F ++            A    T     + + A
Sbjct: 490 AAGNSLGAPTA-----FTPPSISAYGFTFEVD------------ASAPATDRFTFDLSFA 532

Query: 591 IGDGRGALALANAGESTATFGVAGSAASVTMTVARYAADFGGSIARKAATAESRKEAAAA 650
            GD   A+A+A   E T      GS      T+A         +  KA  AE    +A A
Sbjct: 533 EGDNTNAVAMAKLAE-TKLMNNGGS------TLADVYEGTKLQVGGKAKAAEVAFGSAEA 585

Query: 651 VSSEVDSQRQSEEGVNLDEELINLTTYQQAFNASARLIQATKDMFDVL 698
           V S+  ++ QSE GVNLDEE  NL  +QQ++ ASAR++    ++FD L
Sbjct: 586 VYSQAYTRVQSESGVNLDEEAANLMRFQQSYQASARIMTTATEIFDTL 633