Pairwise Alignments

Query, 407 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmA from Caulobacter crescentus NA1000

Subject, 377 a.a., tRNA-specific 2-thiouridylase MnmA (RefSeq) from Shewanella amazonensis SB2B

 Score =  195 bits (496), Expect = 2e-54
 Identities = 121/379 (31%), Positives = 200/379 (52%), Gaps = 26/379 (6%)

Query: 27  AAVGLPEGARIVAAMSGGVDSTVTAALLARAGYDVVGVTLQLYDHGAAISRKGACCAGQD 86
           A +      +++  MSGGVDS+V+A LL + GY V G+ ++ ++          C A +D
Sbjct: 9   AEIAANSSKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEED---DTDEYCAAAED 65

Query: 87  ILDARMAAERIGIPHYVLDYESRFREQVIEDFADAYLRGETPIPCVRCNQTVKFRDLLDV 146
           + DA+   +++GI  + +++ + + + V E F   Y  G TP P + CN+ +KF+  L+ 
Sbjct: 66  LKDAQAVCDKLGIKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEF 125

Query: 147 ARD-LGAEAMATGHYVQRAMPGNGGNRPELRRAADPAKDQSYFLFATTREQLDFLRFPLG 205
           A D L A+ +A GHYV+R    +   + E+ R  D  KDQSYFL+  + EQ+    FP+G
Sbjct: 126 ADDILDADYIAMGHYVRRR---DTDGKTEMLRGIDGNKDQSYFLYTLSHEQVARSLFPVG 182

Query: 206 GMDKPTVRAVAAGLGLSIADKPDSQDICFVPEGKYTTVIDRIRPQGAEAGDVVHLDGRVL 265
            ++KP VR +A   GL   DK DS  ICF+ E K+   +    P  A+ G++   +G ++
Sbjct: 183 ELEKPEVRRIAEEQGLITHDKKDSTGICFIGERKFKDFLATYLP--AQPGNIETPEGDII 240

Query: 266 GRHEGVTRYTIGQRRGLNI-----AVGDPLFVVKINADKRQVIVG---PREALLTASLTL 317
           GRHEG+  +T+GQR+GL I     +  DP +VV  +  +  ++V        L++  + +
Sbjct: 241 GRHEGLMYHTLGQRKGLGIGGMKNSNDDPWYVVDKDMARNVLVVAQGHEHPRLMSKGMRV 300

Query: 318 KEGSWLGAQDSLEAAAEDGQRVLARVRSTREPVPGRLAMID-GALSVVFDGAEEGVAPGQ 376
            +  W+           DG  +  + R  ++ +P  + +ID   + V+FD     V PGQ
Sbjct: 301 NQLHWVD-----RTGPADGATISVKTRYRQQDIPCTVKIIDEQTIEVLFDEPVAAVTPGQ 355

Query: 377 ACVLYDPADPDRVLGGGFI 395
           + V Y   D +  LGGG I
Sbjct: 356 SAVFY---DGEVCLGGGII 371