Pairwise Alignments

Query, 407 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmA from Caulobacter crescentus NA1000

Subject, 381 a.a., tRNA-specific 2-thiouridylase MnmA from Phaeobacter inhibens DSM 17395

 Score =  404 bits (1037), Expect = e-117
 Identities = 207/367 (56%), Positives = 265/367 (72%), Gaps = 10/367 (2%)

Query: 32  PEGARIVAAMSGGVDSTVTAALLARAGYDVVGVTLQLYDHGAAISRKGACCAGQDILDAR 91
           P   R+V AMSGGVDS+V AA LA  GYDVVGVTLQLYDHGAA+++KGACCAG DI DAR
Sbjct: 18  PAETRVVVAMSGGVDSSVVAAHLADEGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDAR 77

Query: 92  MAAERIGIPHYVLDYESRFREQVIEDFADAYLRGETPIPCVRCNQTVKFRDLLDVARDLG 151
             AE  G PHYVLDYE+ F++ VI++FAD+YL G TP+PC+RCN+ VKF+DLL+ ARDL 
Sbjct: 78  RVAEERGFPHYVLDYENIFKDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETARDLE 137

Query: 152 AEAMATGHYVQRAMPGNGGNRPELRRAADPAKDQSYFLFATTREQLDFLRFPLGGM-DKP 210
           A+ MATGHY+QR    +G N PEL  A D  +DQSYFLF+TT EQLD+LRFPLG +  K 
Sbjct: 138 ADCMATGHYIQRK---DGPNGPELHSAEDANRDQSYFLFSTTPEQLDYLRFPLGHLPSKD 194

Query: 211 TVRAVAAGLGLSIADKPDSQDICFVPEGKYTTVIDRIRPQGAEAGDVVHLDGRVLGRHEG 270
             R +A+  GL++ADKPDSQDICFVP G Y +VI+++RP  AE G++VH DGRVLG H+G
Sbjct: 195 ATREMASQYGLAVADKPDSQDICFVPNGDYASVIEKLRPGAAEPGEIVHSDGRVLGTHDG 254

Query: 271 VTRYTIGQRRGLNI-AVGDPLFVVKINADKRQVIVGPREALLTASLTLKEGSWLGAQDSL 329
           V  YTIGQRRGL I  + +PL+VVK++ D +QV+VGP+E L T ++ ++E +WLG +   
Sbjct: 255 VIHYTIGQRRGLGIGGLSEPLYVVKLDVDTKQVVVGPKELLATRTIPVREINWLGDE--- 311

Query: 330 EAAAEDGQRVLARVRSTREPVPGRLAMI-DGALSVVFDGAEEGVAPGQACVLYDPADPDR 388
              + D   +  +VRSTR P    +  I +    V     EEG++PGQACV Y   +  R
Sbjct: 312 PFTSRDEWHLKVKVRSTRPPRDAIIRPISETEAEVELLTPEEGISPGQACVFY-AEEGSR 370

Query: 389 VLGGGFI 395
           + GGG+I
Sbjct: 371 IFGGGWI 377