Pairwise Alignments

Query, 407 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmA from Caulobacter crescentus NA1000

Subject, 384 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  414 bits (1065), Expect = e-120
 Identities = 220/367 (59%), Positives = 269/367 (73%), Gaps = 10/367 (2%)

Query: 32  PEGARIVAAMSGGVDSTVTAALLARAGYDVVGVTLQLYDHGAAISRKGACCAGQDILDAR 91
           P   R+V AMSGGVDS+V AA LA  GYDVVGVTLQLYDHGAA+++KGACCAG+DI DAR
Sbjct: 21  PSETRVVVAMSGGVDSSVVAAELACEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDAR 80

Query: 92  MAAERIGIPHYVLDYESRFREQVIEDFADAYLRGETPIPCVRCNQTVKFRDLLDVARDLG 151
             AE +G PHYVLDYE+ FRE VI++FAD+YL G TP+PC+RCN+ VKF+DLL+ ARDL 
Sbjct: 81  RVAEEMGFPHYVLDYENTFREAVIDEFADSYLGGATPVPCIRCNERVKFKDLLETARDLE 140

Query: 152 AEAMATGHYVQRAMPGNGGNRPELRRAADPAKDQSYFLFATTREQLDFLRFPLGGM-DKP 210
           A+ MATGHY+QR M   G  + EL  AAD  +DQSYFLF+TT+EQLD+LRFPLG +  K 
Sbjct: 141 ADCMATGHYIQRKM---GPAKAELHSAADANRDQSYFLFSTTQEQLDYLRFPLGHLASKA 197

Query: 211 TVRAVAAGLGLSIADKPDSQDICFVPEGKYTTVIDRIRPQGAEAGDVVHLDGRVLGRHEG 270
             RA+AA  GLS+ADKPDSQDICFVP G Y +VI+++RP   E G++V +DG VLG H G
Sbjct: 198 ETRALAAKHGLSVADKPDSQDICFVPNGDYASVIEKLRPGAGEPGEIVDMDGTVLGAHRG 257

Query: 271 VTRYTIGQRRGLNI-AVGDPLFVVKINADKRQVIVGPREALLTASLTLKEGSWLGAQDSL 329
           V  YTIGQRRGL I  +  PL+VVK++ D R+VIVGP+EAL T  + L+E +WLG    L
Sbjct: 258 VIHYTIGQRRGLGIGGLETPLYVVKLDPDARRVIVGPKEALSTRHVPLREINWLG-DAPL 316

Query: 330 EAAAEDGQRVLARVRSTREPVPGRLAMI-DGALSVVFDGAEEGVAPGQACVLYDPADPDR 388
            + AE    +  +VRSTR P    L  I D   +V     EEGV+PGQACV YDP D  R
Sbjct: 317 SSRAE--WPIAVKVRSTRPPRDAILRPISDTEATVELLTPEEGVSPGQACVFYDP-DGTR 373

Query: 389 VLGGGFI 395
           + GGG+I
Sbjct: 374 IFGGGWI 380