Pairwise Alignments

Query, 407 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmA from Caulobacter crescentus NA1000

Subject, 372 a.a., tRNA-specific 2-thiouridylase MnmA (RefSeq) from Shewanella sp. ANA-3

 Score =  205 bits (521), Expect = 2e-57
 Identities = 123/372 (33%), Positives = 201/372 (54%), Gaps = 25/372 (6%)

Query: 34  GARIVAAMSGGVDSTVTAALLARAGYDVVGVTLQLYDHGAAISRKGACCAGQDILDARMA 93
           G +++  MSGGVDS+V+A LL + GY V G+ ++ ++          C A +D+ DA+  
Sbjct: 10  GKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEED---DNDEYCAAAEDLKDAQAV 66

Query: 94  AERIGIPHYVLDYESRFREQVIEDFADAYLRGETPIPCVRCNQTVKFRDLLDVARD-LGA 152
            +++GI  + +++ + + + V E F   Y  G TP P + CN+ +KF+  LD A D L A
Sbjct: 67  CDKLGIKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLDFADDILDA 126

Query: 153 EAMATGHYVQRAMPGNGGNRPELRRAADPAKDQSYFLFATTREQLDFLRFPLGGMDKPTV 212
           + +A GHYV+R    N     ++ R  D  KDQSYFL+  + EQ+    FP+G ++K  V
Sbjct: 127 DYIAMGHYVRRR--DNADGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELEKHEV 184

Query: 213 RAVAAGLGLSIADKPDSQDICFVPEGKYTTVIDRIRPQGAEAGDVVHLDGRVLGRHEGVT 272
           R +A  +GL   DK DS  ICF+ E K+T  +    P  A+ G++   +G ++G+H+G+ 
Sbjct: 185 REIAKKMGLITHDKKDSTGICFIGERKFTEFLGNYLP--AQPGNIETAEGEIIGKHQGLM 242

Query: 273 RYTIGQRRGLNI-----AVGDPLFVVKINADKRQVIVGP---REALLTASLTLKEGSWLG 324
             T+GQR+GL I     +  DP +VV  +  +  ++VG       L++  + + +  W+ 
Sbjct: 243 YQTLGQRKGLGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHWVD 302

Query: 325 AQDSLEAAAEDGQRVLARVRSTREPVPGRLAMI-DGALSVVFDGAEEGVAPGQACVLYDP 383
            +   E     G +++ + R  ++ +P  L  + D  L VVFD     V PGQ+ V Y  
Sbjct: 303 RKGPAE-----GSQIVVKTRYRQQDIPCTLTYLDDNTLKVVFDEPVAAVTPGQSAVFY-- 355

Query: 384 ADPDRVLGGGFI 395
            D +  LGGG I
Sbjct: 356 -DGEVCLGGGII 366