Pairwise Alignments

Query, 295 a.a., exonuclease-endonuclease-phosphatase (EEP1) protein from Caulobacter crescentus NA1000

Subject, 316 a.a., conserved hypothetical protein with endonuclease/exonuclease/phosphatase family domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  123 bits (308), Expect = 6e-33
 Identities = 96/308 (31%), Positives = 138/308 (44%), Gaps = 36/308 (11%)

Query: 8   SLILAAVLASLLPVTGSQAGEPGRALWVMSYNIRYDNPDDRPD---WRTRRGPMVEQIRF 64
           +L+L A++A +    G Q+     ++ V SYN+R  N  D  +   W  R   + + +++
Sbjct: 5   NLLLIALVAIVF--CGCQSNYQPTSITVASYNLRNANGGDSINGNGWGQRYPVIAQIVQY 62

Query: 65  FAPDILGLQEALPAMVDQLAGDLAGYAHYGVGRDDGARLGETTTIFYRAERFQRVLARTY 124
              DI G QE     +  +   L GY + GVGRDDG   GE + IFYR ++F  +    +
Sbjct: 63  HDFDIFGTQECFIHQLKDMKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVIEKGDF 122

Query: 125 WCSPTPDTPSKAYDAALPRTFTRLVLKDRITGVTFDVRNAHLDHVGAESRAKCA----AQ 180
           W S TPD PSK +DA LPR  +    K + TG  F   N H+DH+G ++R + A     +
Sbjct: 123 WLSETPDVPSKGWDAVLPRICSWGHFKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQDK 182

Query: 181 ILALAPWPKARLITLGDFNSAPEEAPYRLLTAPEGPYRDARAAASSVFSPSTGTFNRFTP 240
           +  L    +   I  GDFN       Y    + +G   D+   A   ++   GTFN F P
Sbjct: 183 MKELGKGKELPAILTGDFNVDQTHQSYDAFVS-KGVLCDSYEKAGFRYA-INGTFNDFDP 240

Query: 241 ASIGPP-IDYIFVDRRLNVARFAVPTD------------------------VADAGVISD 275
            S     ID+IFV     V R+ V TD                           A   SD
Sbjct: 241 NSFTESRIDHIFVSPSFQVKRYGVLTDTYRSIVGKGEKKQANDCPEEIDIKTYQARTPSD 300

Query: 276 HFPVLAEI 283
           HFPV  E+
Sbjct: 301 HFPVKVEL 308