Pairwise Alignments
Query, 515 a.a., inositol transport ATP-binding protein IatA from Caulobacter crescentus NA1000
Subject, 502 a.a., D-mannose ABC transporter, ATPase component (from data) from Herbaspirillum seropedicae SmR1
Score = 404 bits (1038), Expect = e-117
Identities = 227/495 (45%), Positives = 319/495 (64%), Gaps = 8/495 (1%)
Query: 3 LLDVSQVSKSFPGVRALDQVDLVVGVGEVHALLGENGAGKSTLIKILSAAHAADAGTVTF 62
LL + + KSF AL + L + GE+HAL+GENGAGKSTL+K+LS HA D G +
Sbjct: 10 LLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEILL 69
Query: 63 AGQVLDPRDAPLRRQQLGIATIYQEFNLFPELSVAENMYLGREPR-RLGLVDWSRLRADA 121
G+ + RD P + GI IYQE + P +SVA N+++G E R RLGL+D + +R+
Sbjct: 70 DGRPVALRD-PGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAMRSRT 128
Query: 122 QALLNDLGLPLNPDAPVRGLTVAEQQMVEIAKAMTLNARLIIMDEPTAALSGREVDRLHA 181
A+L LG L++AEQQ VEIA+A+ +R++IMDEPTAALS RE ++L
Sbjct: 129 DAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLFN 188
Query: 182 IIAGLKARSVSVIYVSHRLGEVKAMCDRYTVMRDGRFVASGDVADVEVADMVRLMVGRHV 241
++ L+ +++IY+SHR+ EV A+ DR TV+RDG FV +++ +V++MVGR +
Sbjct: 189 VVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQMMVGRSL 248
Query: 242 -EFERRKRRRPPGAVVLKVEGVTPAAPRLSAPGYLRQVSFAARGGEIVGLAGLVGAGRTD 300
EF + +R P A L T R A G +R SF R GE++G AGLVGAGRT+
Sbjct: 249 SEFYQHQRIAPADAAQLP----TVMQVRALAGGKIRPASFDVRAGEVLGFAGLVGAGRTE 304
Query: 301 LARLIFGADPIAAGRVLVDDKPLRLRSPRDAIQAGIMLVPEDRKQQGCFLDHSIRRNLSL 360
LARL+FGADP + G +L++ +P+ + PR A++AGI VPEDRK QG FL ++ N ++
Sbjct: 305 LARLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATM 364
Query: 361 PSLKALSALGQWVDERAERDLVETYRQKLRIKMADAETAIGKLSGGNQQKVLLGRAMALT 420
+ LG V R+ + Q+L +K+A ET +GKLSGGNQQKVLL R + +
Sbjct: 365 NVASRHTRLGL-VRSRSLGGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIA 423
Query: 421 PKVLIVDEPTRGIDIGAKAEVHQVLSDLADLGVAVVVISSELAEVMAVSDRIVVFREGVI 480
PKVLI+DEPTRG+DI AK+E++Q++ LA GVAVVVISSEL EV+ + DR++V REG+I
Sbjct: 424 PKVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMI 483
Query: 481 VADLDAQTATEEGLM 495
+L T+E +M
Sbjct: 484 TGELAGAAITQENIM 498
Score = 94.4 bits (233), Expect = 9e-24
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 20/231 (8%)
Query: 275 LRQVSFAARGGEIVGLAGLVGAGRTDLARLIFGADPIAAGRVLVDDKPLRLRSPRDAIQA 334
L + R GEI L G GAG++ L +++ G G +L+D +P+ LR P + A
Sbjct: 26 LSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEILLDGRPVALRDPGASRAA 85
Query: 335 GIMLV-------PEDRKQQGCFLDHSIRRNLSLPSLKALSALGQWVDERAERDLVETYRQ 387
GI L+ P F+ +R L L +D A R + +
Sbjct: 86 GINLIYQELAVAPNISVAANVFMGSELRTRLGL------------IDHAAMRSRTDAVLR 133
Query: 388 KLRIKMADAETAIGKLSGGNQQKVLLGRAMALTPKVLIVDEPTRGIDIGAKAEVHQVLSD 447
+L ++ A G+LS QQ+V + RA+ +++I+DEPT + ++ V+
Sbjct: 134 QLGAGFGASDLA-GRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLFNVVRR 192
Query: 448 LADLGVAVVVISSELAEVMAVSDRIVVFREGVIVADLDAQTATEEGLMAYM 498
L D G+A++ IS +AEV A++DR+ V R+G V +L E ++ M
Sbjct: 193 LRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQMM 243
Score = 85.1 bits (209), Expect = 5e-21
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 7/216 (3%)
Query: 26 VGVGEVHALLGENGAGKSTLIKILSAAHAADAGTVTFAGQVLDPRDAPLRRQQLGIATIY 85
V GEV G GAG++ L ++L A G + G+ + D P + GIA +
Sbjct: 286 VRAGEVLGFAGLVGAGRTELARLLFGADPRSGGDILLEGRPVHI-DQPRAAMRAGIAYVP 344
Query: 86 QEFN---LFPELSVAEN--MYLGREPRRLGLVDWSRLRADAQALLNDLGLPL-NPDAPVR 139
++ LF +++VA N M + RLGLV L A+A + L + + +P+ PV
Sbjct: 345 EDRKGQGLFLQMAVAANATMNVASRHTRLGLVRSRSLGGVARAAIQRLNVKVAHPETPVG 404
Query: 140 GLTVAEQQMVEIAKAMTLNARLIIMDEPTAALSGREVDRLHAIIAGLKARSVSVIYVSHR 199
L+ QQ V +A+ + + +++I+DEPT + ++ ++ L ++ V+V+ +S
Sbjct: 405 KLSGGNQQKVLLARWLEIAPKVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSE 464
Query: 200 LGEVKAMCDRYTVMRDGRFVASGDVADVEVADMVRL 235
L EV +CDR VMR+G A + +++RL
Sbjct: 465 LPEVIGICDRVLVMREGMITGELAGAAITQENIMRL 500