Pairwise Alignments

Query, 735 a.a., CHASE4-family GGDEF/EAL protein from Caulobacter crescentus NA1000

Subject, 1491 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  309 bits (792), Expect = 6e-88
 Identities = 174/430 (40%), Positives = 253/430 (58%), Gaps = 9/430 (2%)

Query: 298  SEARAKHMAMHDALTGLPNRVLFEERLRQGVDGLSRRRGAMAVLAIDLDRFKAVNDTHGH 357
            SEA  + +A +D LTGLPNR LF  RL Q +   ++    +A++ +DLDRFK VND+ GH
Sbjct: 1048 SEADLRRLANYDVLTGLPNRSLFAARLNQAIHKATQNEEKLALMFLDLDRFKHVNDSFGH 1107

Query: 358  AAGDELIQVIGARLAGLCRASETLARLGGDEFGVVAAEIDPQGAAALAERLVAALAAPVD 417
              GD L+    ARL        TL R GGDEF V+    +      LA  ++  +  P  
Sbjct: 1108 GMGDALLVEAAARLQSCIDPEYTLCRFGGDEFVVLIHGAEVDTLNHLANTILGQIETPFK 1167

Query: 418  LSCGTVFVGGSVGVAVITPDEAFVGAVEAARRADVAMYRAKDEGRGRYCFFEAEMDAALK 477
            L     ++  S+G++ I PD+A        + AD+AMY AK+EGRG + ++  E +A   
Sbjct: 1168 LFGREFYISTSIGIS-IWPDDARQPEA-LIKNADLAMYHAKEEGRGNFQYYSQERNAEAL 1225

Query: 478  ARRGLEADLRLALKDGGVWVAYQPQVDAA--GKVLGVEALARWTHPEKGAISPGAFVPLA 535
                LEADLR AL+     + YQPQVD     +V+G+EAL RW HP+ G I    F+ +A
Sbjct: 1226 YHLRLEADLRKALERQEFCLHYQPQVDVNDDNQVIGMEALLRWQHPKDGYIRTDIFIKVA 1285

Query: 536  EDCGLIDELGRLIMRRAFTDSLRW-----KDLKVAVNVSALQMRQAGFPDLVAQILAETG 590
            E CGL+ ++ + ++R+A  D  RW     +  K++VN+SA+  RQ  F D + + L ET 
Sbjct: 1286 EACGLVIDIDKWVLRQACLDGARWSRKLKRPFKISVNISAVHFRQPDFIDHLRRTLEETC 1345

Query: 591  ARAEKIELEITEGALLGDDEATHDAISRLREMGFSLALDDFGTGYSSLSYLRRYPIDKIK 650
               E + LEITEG L+ +     D +  LREMG  +A+DDFGTGYSSL+YLR + ++ +K
Sbjct: 1346 IPVENLALEITEGVLMKELHIARDHLRLLREMGVQVAIDDFGTGYSSLAYLRHFDVNLLK 1405

Query: 651  IDRSFITPLGGDKEAGAVVAAIVRLAKALKLSVIAEGVETNQQREQLHEIGCVQAQGFLF 710
            IDRSF+  +  ++   A+V++I+ LA+ LKL V+AEGVET +Q  Q+   GC   QG+ F
Sbjct: 1406 IDRSFLIDIADNQADQAIVSSIIELARNLKLKVVAEGVETREQLNQVLSRGCHVIQGYYF 1465

Query: 711  SAALAADAID 720
            +  +A D +D
Sbjct: 1466 AKPMARDDMD 1475