Pairwise Alignments

Query, 735 a.a., CHASE4-family GGDEF/EAL protein from Caulobacter crescentus NA1000

Subject, 1251 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  328 bits (840), Expect = 1e-93
 Identities = 177/441 (40%), Positives = 265/441 (60%), Gaps = 16/441 (3%)

Query: 299  EARAKHMAMHDALTGLPNRVLFEERLRQGVDGLSRRRG---AMAVLAIDLDRFKAVNDTH 355
            E    H+A+HD LTGLPNR L  +R+ + +    RRR      AVL +DLDRFK +ND+H
Sbjct: 766  EEMLTHLALHDPLTGLPNRALLLDRIERAIQ--RRRRNDSYRFAVLMLDLDRFKFINDSH 823

Query: 356  GHAAGDELIQVIGARLAGLCRASETLARLGGDEFGVVAAEID-PQGAAALAERLVAALAA 414
            GH  GD L+  +  R+  + RA +T+ARLGGDEF ++  ++D P+    +  RL+AAL  
Sbjct: 824  GHTTGDNLLVEVARRMRPVVRAGDTVARLGGDEFALLLEDVDSPRRIVQITRRLLAALER 883

Query: 415  PVDLSCGTVFVGGSVGVAVITPDEAFVGAVEAARRADVAMYRAKDEGRGRYCFFEAEMDA 474
            PV +    V    S+G+ + T  + +  A    R AD+AMY+AK +G+GR+  F   M  
Sbjct: 884  PVRMGAKVVRTSASIGMVLRT--QGYDTADALLRDADIAMYQAKAQGKGRFRVFNQSMHR 941

Query: 475  ALKARRGLEADLRLALKDGGVWVAYQPQVDAAG-KVLGVEALARWTHPEKGAISPGAFVP 533
                   LE DL +A++   +++ YQP +   G ++LG EAL RW HP +GA+ P  F+P
Sbjct: 942  HTMEMMTLEGDLSMAMRRKQLYLEYQPVLAVDGARLLGFEALVRWRHPTEGAVPPARFIP 1001

Query: 534  LAEDCGLIDELGRLIMRRAFTDSLRWK-------DLKVAVNVSALQMRQAGFPDLVAQIL 586
            +AE+ GLI  +G+ ++ +A     RW+       DL V+VN+SA Q  Q      VA+IL
Sbjct: 1002 MAEETGLILRIGQWVLEQAAATLARWRATLPGAHDLYVSVNLSARQASQPNLTGRVARIL 1061

Query: 587  AETGARAEKIELEITEGALLGDDEATHDAISRLREMGFSLALDDFGTGYSSLSYLRRYPI 646
            ++TG   E ++LEITE A++ D +     +  LR +G  + +DDFGTGYSSL+YL+R+P+
Sbjct: 1062 SDTGLPPEALKLEITETAIMKDPDGALQRLEALRRLGVGIGIDDFGTGYSSLAYLQRFPV 1121

Query: 647  DKIKIDRSFITPLGGDKEAGAVVAAIVRLAKALKLSVIAEGVETNQQREQLHEIGCVQAQ 706
            D +K+DRSF++ + GD E   +V  +V L ++L L V+AEGVET +Q   + E+GC   Q
Sbjct: 1122 DTLKVDRSFVSAVAGDAENREIVRTVVTLGRSLGLHVVAEGVETAEQFAIVAELGCHSVQ 1181

Query: 707  GFLFSAALAADAIDTIVDEGG 727
            G+ FS  +A +     +  GG
Sbjct: 1182 GYHFSRPVAEERAVAFIAAGG 1202