Pairwise Alignments

Query, 735 a.a., CHASE4-family GGDEF/EAL protein from Caulobacter crescentus NA1000

Subject, 896 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  317 bits (811), Expect = 2e-90
 Identities = 189/440 (42%), Positives = 255/440 (57%), Gaps = 11/440 (2%)

Query: 295 LVASEARAKHMAMHDALTGLPNRVLFEERLRQGVDGLSRRRGAMAVLAIDLDRFKAVNDT 354
           L A E++ +H A HDALTGLPNR L  +RL   ++G  R    +AVL++DLD FK VND+
Sbjct: 447 LKAKESQIQHQAHHDALTGLPNRALLRDRLGMAINGARREDRKVAVLSVDLDNFKQVNDS 506

Query: 355 HGHAAGDELIQVIGARLAGLCRASETLARLGGDEFGVVAAEIDPQ-GAAALAERLVAALA 413
            GH  GD  +Q    ++  + R  +TLAR+GGDEF VV  +++ +  AA +AERL+A   
Sbjct: 507 LGHMVGDIYLQQAAEQMRQMVRPQDTLARVGGDEFVVVLQDVEGERDAAQVAERLLARFT 566

Query: 414 APVDLSCGTVFVGGSVGVAVITPDEAFVGAVEAARRADVAMYRAKDEGRGRYCFFEAEMD 473
            PV +    +FVG SVG+A+   D      +   R AD+AM RAK++G+ RY  F   M+
Sbjct: 567 DPVRVQEHELFVGASVGIALFPDDGDDPDTL--VRNADIAMSRAKEQGKRRYHLFTPAMN 624

Query: 474 AALKARRGLEADLRLALKDGGVWVAYQPQVDA-AGKVLGVEALARWTHPEKGAISPGAFV 532
                R  LE DL  AL  G +   YQP+VD   G + G+EALARW   +     P  F+
Sbjct: 625 DRAVRRLSLEGDLHRALAAGDITAHYQPRVDLNTGLITGMEALARWIRADGSQEHPAEFI 684

Query: 533 PLAEDCGLIDELGRLIMR------RAFTDSLRWKDLKVAVNVSALQMRQAGFPDLVAQIL 586
           PLAE  GLI  LG  ++R      RA  D+    DL VAVN+S  Q R      +VA +L
Sbjct: 685 PLAESTGLIVPLGEHMLRLACAKTRALCDAGH-ADLHVAVNLSVHQFRHRNLVGMVADVL 743

Query: 587 AETGARAEKIELEITEGALLGDDEATHDAISRLREMGFSLALDDFGTGYSSLSYLRRYPI 646
           AETG     +ELEITE  ++ D + T   +++L EMG +L++DDFGTGYSSL  L+  P+
Sbjct: 744 AETGLPPHLLELEITESTIVTDVDHTIRKLNQLAEMGIALSVDDFGTGYSSLYQLKNLPL 803

Query: 647 DKIKIDRSFITPLGGDKEAGAVVAAIVRLAKALKLSVIAEGVETNQQREQLHEIGCVQAQ 706
             +KIDRSFI  +  D    A+ A I+ +A  L L V+AEGVET +Q   L   GC + Q
Sbjct: 804 TSLKIDRSFIRDIPDDPNDAAIAATIITMADRLGLRVVAEGVETPEQLNFLLLEGCHEVQ 863

Query: 707 GFLFSAALAADAIDTIVDEG 726
           GFLFS  L  D    ++  G
Sbjct: 864 GFLFSRPLPPDEFTALLARG 883