Pairwise Alignments

Query, 735 a.a., CHASE4-family GGDEF/EAL protein from Caulobacter crescentus NA1000

Subject, 1076 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  322 bits (826), Expect = 5e-92
 Identities = 185/436 (42%), Positives = 251/436 (57%), Gaps = 11/436 (2%)

Query: 298  SEARAKHMAMHDALTGLPNRVLFEERLRQGVDGLSRRRG-AMAVLAIDLDRFKAVNDTHG 356
            S  R +H A HD LTGLPNRVLF +RL+  +   +RRR    A+L +DLDRFK +ND+ G
Sbjct: 626  SRERLEHQAFHDPLTGLPNRVLFHDRLQMALKRAARRRNYTFAMLYLDLDRFKVINDSLG 685

Query: 357  HAAGDELIQVIGARLAGLCRASETLARLGGDEFGVVAAEIDPQGAAA-LAERLVAALAAP 415
            H  GD L++V+ A+L    R  +T+AR GGDEFGV+  E   +G A  +A R+ A LA P
Sbjct: 686  HDVGDALLKVVSAKLRECVRDVDTVARFGGDEFGVLLEETPTRGTAVRVARRIRAHLAEP 745

Query: 416  VDLSCGTVFVGGSVGVAVITPDEAFVGAVEAARRADVAMYRAKDEGRGRYCFFEAEMDAA 475
            V +    VF   S+G+ + T  + +    E  R AD AMYRAK++G+ R+  F   M   
Sbjct: 746  VRIGPHEVFTTASIGIVLRT--DQYSTPEELVRDADTAMYRAKEQGQSRFKVFNKRMREE 803

Query: 476  LKARRGLEADLRLALKDGGVWVAYQPQVDAA-GKVLGVEALARWTHPEKGAISPGAFVPL 534
                  +E DLR A++   + + YQP V    G + GVEAL RWT  E G ISP  FVP+
Sbjct: 804  ALRLLTIETDLRRAVERQEMRLHYQPVVALEDGGLHGVEALLRWTRTEGGDISPAEFVPV 863

Query: 535  AEDCGLIDELGRLIMRRAFTDSLRWKDLK------VAVNVSALQMRQAGFPDLVAQILAE 588
            AED GLI  +G   +        RW +        V VN+S  Q  Q G P  V  +L  
Sbjct: 864  AEDTGLITSIGAFALEEVCLQLRRWNEAGLPPPGVVHVNISGRQFMQPGLPHAVEMLLER 923

Query: 589  TGARAEKIELEITEGALLGDDEATHDAISRLREMGFSLALDDFGTGYSSLSYLRRYPIDK 648
            TG     +  E+TE  L+         +++LR++G  L LDDFGTGYSSL YL+R P+D 
Sbjct: 924  TGTDPRSLRFEVTESVLMRHGSQAITVMAQLRDLGIRLCLDDFGTGYSSLGYLKRLPVDS 983

Query: 649  IKIDRSFITPLGGDKEAGAVVAAIVRLAKALKLSVIAEGVETNQQREQLHEIGCVQAQGF 708
            IKIDRSF+  L  D++  A+V +IV L   L L ++AEGVET  Q E L  +GC  AQGF
Sbjct: 984  IKIDRSFVAGLEHDRDGQAIVRSIVSLGLHLGLEIVAEGVETPTQAEMLASLGCRYAQGF 1043

Query: 709  LFSAALAADAIDTIVD 724
            L++  ++AD +  ++D
Sbjct: 1044 LYAPPVSADDLAAMLD 1059