Pairwise Alignments

Query, 356 a.a., bacterial peptide chain Release factor 1 (RF-1) from Caulobacter crescentus NA1000

Subject, 363 a.a., peptide chain release factor 1 (RefSeq) from Shewanella amazonensis SB2B

 Score =  365 bits (938), Expect = e-106
 Identities = 197/354 (55%), Positives = 258/354 (72%), Gaps = 8/354 (2%)

Query: 7   RLDQVLDRFREVEARMGAAT---DGAEIVKLSKEHAELRPVAEAVERLAKLSA--ERAEL 61
           +L+ +L+R  EV A +  A+   D      LSKE+A+L  V +  +   +  A  E A+ 
Sbjct: 8   KLEGLLERNEEVLALLSDASIISDQDRFRALSKEYAQLEDVVKGFKAYQQAVADLETAKE 67

Query: 62  DVMASDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDEAA 121
            +   DPE+ EM ++EI++    L  +E EL ++L PKD ++ A+A +E+RAG GGDEAA
Sbjct: 68  MLEEDDPELKEMAQEEIKSAKASLERLEAELQILLLPKDPNDEANAFVEIRAGAGGDEAA 127

Query: 122 LFAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHRVQ 181
           +FAGDLFRMY RYA+TQ W+VEI S +EGE GG+KE++A  +G+ V+G+LKFESG HRVQ
Sbjct: 128 IFAGDLFRMYSRYAETQRWQVEIMSANEGEHGGYKEVIARFSGERVYGKLKFESGGHRVQ 187

Query: 182 RVPATEAQGRIHTSAATVAVLPEAEDVE-IEIKESDLRIDTYRSSGAGGQHVNKTDSAVR 240
           RVP TE+QGR+HTSA TVAVL E  + E +EI  S+LRIDT+R+SGAGGQHVNKTDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVLHEVPEAEAVEINPSELRIDTFRASGAGGQHVNKTDSAIR 247

Query: 241 ITHLPTGVVV-TSSEKSQHQNRARAMKNLKARLYDMQREALDSARSEARKSQVGSGDRSE 299
           ITHLPTG VV    E+SQH+N+ARAM  L ARL   + E   SA +  R++ VGSGDRSE
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKARAMSVLVARLQAAEDEKRRSAEATTRRNLVGSGDRSE 307

Query: 300 RIRTYNFPQGRVTDHRINLTLYNLARIMEGDALDDVINPLIAEDQAERLASLEE 353
           RIRTYNFPQGRV+DHRINLTLY L  +MEGD L+ +I P++ E QA+ LA+L +
Sbjct: 308 RIRTYNFPQGRVSDHRINLTLYRLNEVMEGD-LNALIEPIVQEHQADLLAALAD 360