Pairwise Alignments

Query, 356 a.a., bacterial peptide chain Release factor 1 (RF-1) from Caulobacter crescentus NA1000

Subject, 357 a.a., peptide chain release factor 1 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  371 bits (953), Expect = e-107
 Identities = 186/332 (56%), Positives = 253/332 (76%), Gaps = 6/332 (1%)

Query: 6   ARLDQVLDRFREVEARMGAA---TDGAEIVKLSKEHAELRPVAEAVERLAKLSAERAELD 62
           A+L+ +  RF ++E ++ ++    D     KL+K HA+L+ V +   R  +L    A+  
Sbjct: 3   AKLENLERRFEDLEQQLASSEVFNDQDRYRKLTKAHADLKEVVDVFRRYKELRQNLADNK 62

Query: 63  VMA--SDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDEA 120
            +   +DPE+  M  +E ++L+  +P +E+EL L+L PKD  +  + I+E+RAGTGG+EA
Sbjct: 63  ELLDDADPEIRSMAHEEAKSLESAIPEIEQELQLLLLPKDPLDEKNTIVEIRAGTGGEEA 122

Query: 121 ALFAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHRV 180
           ALFA DLFRMY RYA+ +GW+VEI S +E + GG+KE++A I GD V+ RLKFESG HRV
Sbjct: 123 ALFAADLFRMYSRYAEIRGWKVEILSANESDTGGYKEVIALIVGDKVYSRLKFESGTHRV 182

Query: 181 QRVPATEAQGRIHTSAATVAVLPEAEDVEIEIKESDLRIDTYRSSGAGGQHVNKTDSAVR 240
           QRVPATE+QGRIHTSAATVA+LPEAE+V++EI+  D+RID +R+SGAGGQHVNKT+SAVR
Sbjct: 183 QRVPATESQGRIHTSAATVAILPEAEEVDVEIRPDDIRIDVFRASGAGGQHVNKTESAVR 242

Query: 241 ITHLPTGVVVT-SSEKSQHQNRARAMKNLKARLYDMQREALDSARSEARKSQVGSGDRSE 299
           ITH+P+G+VV+   EKSQH+N+A+AMK L +RL   +++   +  +  R+SQVGSGDRSE
Sbjct: 243 ITHMPSGIVVSCQDEKSQHKNKAKAMKVLASRLLQAEQDRQHNEMAADRRSQVGSGDRSE 302

Query: 300 RIRTYNFPQGRVTDHRINLTLYNLARIMEGDA 331
           RIRTYNFPQGRVTDHRINLTLY+L R+MEG+A
Sbjct: 303 RIRTYNFPQGRVTDHRINLTLYSLDRVMEGEA 334