Pairwise Alignments

Query, 356 a.a., bacterial peptide chain Release factor 1 (RF-1) from Caulobacter crescentus NA1000

Subject, 363 a.a., peptide chain release factor 1 (RefSeq) from Shewanella sp. ANA-3

 Score =  358 bits (919), Expect = e-103
 Identities = 188/354 (53%), Positives = 255/354 (72%), Gaps = 8/354 (2%)

Query: 7   RLDQVLDRFREVEARMGAAT---DGAEIVKLSKEHAELRPVAEAVE--RLAKLSAERAEL 61
           +L+ +L+R  EV A +G A+   D      LSKE+++L  V    +  + A+   E A+ 
Sbjct: 8   KLEGLLERNEEVLALLGDASVIADQERFRALSKEYSQLEEVVAGFKAYQQAQADLESAKE 67

Query: 62  DVMASDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDEAA 121
            +   D EM EM ++EI+A   +L  +E EL ++L PKD +++ +A +E+RAG GGDEAA
Sbjct: 68  MLEEDDAEMREMAQEEIKAAKAELERLEAELQILLLPKDPNDDTNAFIEIRAGAGGDEAA 127

Query: 122 LFAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHRVQ 181
           +FAGDLFRMY RYA+   W++EI S +EGE GGFKEI+  ++G+G +G+LKFESG HRVQ
Sbjct: 128 IFAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQ 187

Query: 182 RVPATEAQGRIHTSAATVAVLPEAEDVE-IEIKESDLRIDTYRSSGAGGQHVNKTDSAVR 240
           RVP TE+QGR+HTSA TV V+ E  + E I I  +DL++DT+RSSGAGGQHVNKTDSA+R
Sbjct: 188 RVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIR 247

Query: 241 ITHLPTGVVV-TSSEKSQHQNRARAMKNLKARLYDMQREALDSARSEARKSQVGSGDRSE 299
           ITH+PTG+VV    ++SQH+NRA+AM  L AR+  ++ E   SA    R+S V SGDRSE
Sbjct: 248 ITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLVASGDRSE 307

Query: 300 RIRTYNFPQGRVTDHRINLTLYNLARIMEGDALDDVINPLIAEDQAERLASLEE 353
           R+RTYNFPQGRV++HRINLTLY L  +MEGD LD ++ PL+ E QA+ LA+L +
Sbjct: 308 RVRTYNFPQGRVSEHRINLTLYRLNEVMEGD-LDAILGPLMQEHQADLLAALAD 360