Pairwise Alignments

Query, 478 a.a., D-xylose transporter (from data) from Caulobacter crescentus NA1000

Subject, 473 a.a., Sugar transporter from Pseudomonas syringae pv. syringae B728a

 Score =  201 bits (511), Expect = 4e-56
 Identities = 136/485 (28%), Positives = 238/485 (49%), Gaps = 30/485 (6%)

Query: 3   SVSNAGPSAGMSADGGKVNMTFVAAIVAVATIGGFMFGYDSGVING-----TQEGLESAF 57
           S S+   +AG        +   +   V VAT+G   FGYD+G+I G     T    +   
Sbjct: 2   SSSSTSAAAGQQGRQRAASNRLIFISVLVATMGALAFGYDTGIIAGALPFMTLPADQGGL 61

Query: 58  NLSKLGTGLNVGAILIGCAIGAFAAGRLADVWGRRTVMIISALLFVISAIGTGAAESSIV 117
            L     G+   ++++G A G+ A+G ++D +GRR  + + ++LF+  A+GT  A S   
Sbjct: 62  GLDAYSEGMVTASLIVGAAFGSLASGYISDRFGRRLTLRLLSVLFIAGALGTAIAPSIPF 121

Query: 118 FIIFRLIGGLGVGAASVLCPVYISEVTPANIRGRLSSVQQIMIITGLTGAFVAN---YAL 174
            I  R + G+ VG  S   PV+I+E+   + R RL S  ++MI++G   A+V +    AL
Sbjct: 122 MIAARFVLGIAVGGGSATVPVFIAEIAGPSRRARLVSRNELMIVSGQLLAYVLSAVMAAL 181

Query: 175 AHTAGSSTAEFWLGLPAWRWMFWMQIIPAGVFFLCLLGIPESPRYLVAKGKDAQAEAILS 234
            HT G            WR+M  + ++P  +  +    +P SPR+L +KG+  +A+ +L 
Sbjct: 182 LHTPG-----------IWRYMLAVAMVPGVLLLVGTFFVPASPRWLASKGRFDEAQDVLE 230

Query: 235 RLFGAGQGA-KKVEEIRA-SLSADHKPTFSDLLDPTTKKLRVILWAGLVLAVFQQLVGIN 292
           +L  + Q A ++V+E++A    A H+P   +LL    + +  +L  G+ L    Q  G+N
Sbjct: 231 QLRPSKQDAQREVDEMKAQDEEARHRPKARELL--RQRWVIKLLLIGVGLGFTAQFTGVN 288

Query: 293 IVFYYGSVLWQSVGFTEDDSLKINILSGTLSILACLLAIGLIDKIGRKPLLLIGSAGMAV 352
              YY  ++ ++ G   + +L   I +G +S++A LL I  I + GR+ LL+ G   + +
Sbjct: 289 AFMYYTPIILKNTGMGTNAALTATIGNGVVSVIATLLGIWAIGRYGRRHLLMTGLV-IVI 347

Query: 353 TLGVLTWCFSTATTVNGALTLGDQIGLTALIAANLYVIFFNLSWGPVMWVMLGEMFPNQM 412
            +     C       N   +       TAL    ++++F  +   PV W+++ E+FP Q+
Sbjct: 348 LMQAALGCVLQFMPQNMTQS------YTALACILVFLLFMQMCISPVYWLLMSELFPMQV 401

Query: 413 RGSALAVCGFAQWIANFAISVSFPALAAASLPMTYGFYALSAVVSFFLVQKLVHETRGKE 472
           RG         QW+ N +++ +FP         T+  +A   + S   V   + ET+GK 
Sbjct: 402 RGLLTGTAVSMQWLFNASVAFTFPIAVDTIGNPTFFIFAAINIGSLIFVFLCLPETKGKS 461

Query: 473 LEAMQ 477
           LE ++
Sbjct: 462 LEQIE 466