Pairwise Alignments

Query, 478 a.a., D-xylose transporter (from data) from Caulobacter crescentus NA1000

Subject, 471 a.a., sugar porter family MFS transporter from Rahnella sp. WP5

 Score =  200 bits (508), Expect = 1e-55
 Identities = 149/469 (31%), Positives = 236/469 (50%), Gaps = 39/469 (8%)

Query: 19  KVNMTFVAAIVAVATIGGFMFGYDSGVINGTQEGLESAFNLSKLGTGLNVGAILIGCAIG 78
           KV   FV+   A+A   G +FG D GVI+G    +   F LS       V  +++G A G
Sbjct: 18  KVMNLFVSFAAAMA---GLLFGLDIGVISGALPFITEHFVLSSRQQEWVVSIMMLGAAFG 74

Query: 79  AFAAGRLADVWGRRTVMIISALLFVISAIGTGAAESSIVFIIFRLIGGLGVGAASVLCPV 138
           A A G L+   GR+  ++ +ALLF++ ++G+  A S  + ++ RLI G  VG AS   P+
Sbjct: 75  ALANGWLSFRLGRKYSLMAAALLFILGSLGSAFASSIEILMVSRLILGFAVGIASYTAPL 134

Query: 139 YISEVTPANIRGRLSSVQQIMIITGLTGAFVANYALAHTAGSSTAEFWLGLPAWRWMFWM 198
           Y+SE+    IRG++ ++ Q+M+  G+  AF     L+ TA SS+ +       WR M  +
Sbjct: 135 YLSEMASETIRGKMIAMYQLMVTIGILLAF-----LSDTAFSSSGD-------WRAMLGV 182

Query: 199 QIIPAGVFFLCLLGIPESPRYLVAKGKDAQAEAILSRLFGAGQGAK-KVEEIRASLSADH 257
             IPA V  + +  +P SPR+L AKG+  +AE +L  L    + A+ ++ EIR SL    
Sbjct: 183 LAIPAFVLMIAVCFLPNSPRWLAAKGQHIEAERVLRMLRDTSEKARQELNEIRESLKL-- 240

Query: 258 KPTFSDLLDPTTKKLRVILWAGLVLAVFQQLVGINIVFYYGSVLWQSVGFTEDDSLKI-N 316
           K    +L    +   R +   G++L   QQ  G+NI+ YY   ++   GFT      I  
Sbjct: 241 KQGGWELFKANSNVRRAV-GLGMLLQAMQQFTGMNIIMYYAPKIFNLAGFTSTRQQMIAT 299

Query: 317 ILSGTLSILACLLAIGLIDKIGRKPLLLIGSAGMAVTLGVLTWC---FSTATTVNGALTL 373
           I+ G   +LA  +AIG++DK GRKP L IG + +A+   VL +C   F+  T   GA   
Sbjct: 300 IIVGLTFVLATFIAIGMVDKAGRKPALKIGFSVIALGTLVLGYCLQQFNQGTA--GAALS 357

Query: 374 GDQIGLTALIAANLYVIFFNLSWGPVMWVMLGEMFPNQMRGSALAVCGFAQWIANFAISV 433
              +G+T +  A      + +S  PV+W++  E+ P + R   +       WI+N  I  
Sbjct: 358 WLSVGMTMMCIAG-----YAMSAAPVVWILCSEIQPLKSRDFGITCSTTTNWISNMIIGA 412

Query: 434 SFPAL-----AAASLPMTYGFYALSAVVSFFLVQKLVHETRGKELEAMQ 477
           +F  L     AA +  +      +  V++F L+     ET+   LE ++
Sbjct: 413 TFLTLMDNIGAAGTFWLYTALNVMFVVITFILIP----ETKNVTLEQIE 457