Pairwise Alignments

Query, 975 a.a., TonB-dependent receptor from Caulobacter crescentus NA1000

Subject, 891 a.a., N-acetylglucosamine-regulated TonB-dependent outer membrane receptor from Xanthomonas campestris pv. campestris strain 8004

 Score =  278 bits (710), Expect = 2e-78
 Identities = 265/936 (28%), Positives = 399/936 (42%), Gaps = 128/936 (13%)

Query: 24  AAPSVVFAQQ--TAQDDQTVEEVVVTGQRAAIQSAQKIKQNAEQLVDSITSTDIGALPDR 81
           AAP    A Q  TAQ   T++ V V G R++++SA   KQ  +++ DSI + DIG LPD 
Sbjct: 37  AAPDGTAAAQPATAQPTSTLDAVQVRGVRSSVESAISTKQAHKEISDSIVAEDIGKLPDN 96

Query: 82  SVTEALQRVAGVTIARTSYGRDVDRISVEGSGVQVRGLSWVRGELNGRDSFSAKSGRSLS 141
           SV  ALQRV GV +AR   G +V +       V VRGL  V   L+GR+ F+   GR + 
Sbjct: 97  SVAAALQRVTGVQVARA--GGEVGQ-------VLVRGLPNVVTTLDGRNVFTT-VGRDME 146

Query: 142 FEDVPPELMAGVDVYKNPSADLVEGGVGGTVNLRTRLPFD-SAKRIMAFSADMSIGDMSK 200
             DVP EL+  VDVYK   A   EGG+ G V++  R PFD      +A S     GD ++
Sbjct: 147 LADVPAELLRSVDVYKTTGAQFQEGGIAGVVDVHLRRPFDFDDDSTIAGSVSALRGDQAE 206

Query: 201 KWKPTGSALYSDRWDTNIGELGFLVSLSESQLASRTDTISVDPYFARTN-LVAGRTVYVP 259
           K  P GS   S RW+T +G +G + S++  +   +        Y  + N L   + +YVP
Sbjct: 207 KTVPNGSLTMSQRWETGVGRMGVMGSVAYQRRPYQESNTLYGTYDLKPNPLEPAQQLYVP 266

Query: 260 GGFGYRSLDFERERKGIAAAVQWRPNDQWDAALTFLRSSASQASTERAVGFNPGSTNGPA 319
              G      +R+RK    + QW P+D  +  +  L                PG  N   
Sbjct: 267 YSAGGLMARGDRKRKSANLSFQWAPSDNSEIYIDTLYIGYDNRPQVNYWLPFPGLANAEN 326

Query: 320 AGTTFTYDSAGHFLKGTLAQSPGGNSLGSSTLDTRFADRSSVTSDYALKVNYNPNDKWAF 379
              + +     + L G +A+          TL +  A +++  +  A        ++   
Sbjct: 327 T-ESVSVRPGSNVLDGLVARD-------LQTLSSTQAHKNASDTYQAALGGRWSGERVKL 378

Query: 380 SADIQYIYAKTKTVDFTVFNALGSDAAPATLDLTGDLPA----ITMNNNKAY-TSNPASY 434
           S ++ Y Y+  K   FT    L  D     L +     A    IT  +   Y  + P ++
Sbjct: 379 STELAYTYSDAKNRAFT----LDMDTRAPLLHMRSGGGAADTWITQRDGSPYDITAPGNW 434

Query: 435 YLSAAMDHHDRNDASEWAQRFDGAYTFDEGGWLRSFRFGVRNTYRESTTRETTYNWGAVA 494
            L    D  +R    EWA R D  +  D G  L S   G R + R +T    + + GA  
Sbjct: 435 VLRQYYDSWNRQRGEEWAWRGDATFELDAGP-LTSLEVGARASRRTATNH--SGDTGARD 491

Query: 495 PSWSAPSINNLASYQGYYELYPFTNYFRGATNLPATFILPTAS--LVQNYAAGGALVAKL 552
               AP +  L+   G   + P  N   GA    +          L+Q  A    L+ + 
Sbjct: 492 NITGAPIL--LSDVPGLASVTP-GNMLDGARAFTSDRWASANQDVLLQQSARLRTLMGQS 548

Query: 553 AASNGGWWGTFNGDYDSLTAGGSGGGVNRQKEKTLAAYALLRFGNEVSLWGEAREIDGNI 612
             +       F  D                +E   A YA L +G  +        +DG I
Sbjct: 549 PEAPLENPALFFDD----------------REDNYAVYAQLNYGFSLG----PVPVDGRI 588

Query: 613 GLRVVKTESEGKGLQLFSRNNTPTVPAAELAFGNGARRDLTGGRDYVSVLPSLNARLKIT 672
           G R  + +S  +G Q                  +G    ++  R    VLP+ +A   + 
Sbjct: 589 GARATRLDSSLEGSQSL----------------DGVLSPVSIDRRIDKVLPNYSANFTLY 632

Query: 673 PQMFLRFAAAKSIVRPDFGQLQPFFSIGATNGYLNGSVCSTSIPDGAQSNCVFQYTATGG 732
             + LR A + +I RP+F  L P  ++  +         + S+P  A+ N        GG
Sbjct: 633 ENLILRLAGSTTITRPEFADLNPQLALYQS---------TESLP--ARGN--------GG 673

Query: 733 NPELKPTRSTQYDLAYEWYFASTGSLTATVFYKDIYNFVTNGVNTVKFTNNGVTRDVLVT 792
           NP+L+P  S   DL+ EWYF     L+   F++DI  ++ N         +G+T    ++
Sbjct: 674 NPQLRPVESRNADLSLEWYFRPGSLLSLAGFHRDIDGYIQN--YAADELIDGITYS--IS 729

Query: 793 QPYNAGHGTIKGFEVAYQQYFSFLPGALKGLGTQANFTYIDSEGARNAASNPYDTSQVSS 852
           +P N G G++KG EV Y Q++ FLPG L G GTQ N+TYI +E     A +P   SQ   
Sbjct: 730 RPRNTGQGSLKGVEVGYTQFYDFLPGWLSGFGTQLNYTYISAE-----ADSPEGVSQ--- 781

Query: 853 LVGGARDDLPLEGLSKTSYNVAALYDLGKVSARLAYNWRERFLQTTSAA-------NKNI 905
                    PL  +SK +YN   +Y+  + SAR+AYNWR  +  + +++       N+  
Sbjct: 782 ---------PLTNVSKNAYNAILMYEYARFSARVAYNWRGDYAVSFNSSGDQPEQINQGR 832

Query: 906 PAWFDDYGQLDGSIFYTIDDNLKVGFQAVNLTNTKT 941
             W      LD +  Y + + L V  +A NL  T T
Sbjct: 833 EKW------LDVAFNYELSERLTVFAEATNLLGTTT 862