Pairwise Alignments

Query, 975 a.a., TonB-dependent receptor from Caulobacter crescentus NA1000

Subject, 913 a.a., N-acetylglucosamine-regulated TonB-dependent outer membrane receptor from Xanthomonas campestris pv. campestris strain 8004

 Score =  136 bits (343), Expect = 6e-36
 Identities = 110/364 (30%), Positives = 157/364 (43%), Gaps = 76/364 (20%)

Query: 583 KEKTLAAYALLRFGNEVSLWGEAREIDGNIGLRVVKTESEGKGLQLFSRNNTPTVPAAEL 642
           KE T   Y  L F        E+ +  GN+G+R+V T ++ +    F ++N         
Sbjct: 597 KEITQNVYTQLNF--------ESGQWRGNVGVRLVDTTNKSE----FWQSND-------- 636

Query: 643 AFGNGARRD-LTGGRDYVSVLPSLNARLKITPQMFLRFAAAKSIVRPDFGQLQPFFSIGA 701
               GA  D +    DY   LPS N    +T    LRF+AAK I RP +  L   F+I +
Sbjct: 637 ---GGANFDRVAETNDYRKALPSFNIAYDVTDDAVLRFSAAKVIARPRYADLAGTFTINS 693

Query: 702 TNGYLNGSVCSTSIPDGAQSNCVFQYTATGGNPELKPTRSTQYDLAYEWYFASTGSLTAT 761
             G L                     TA GGNP+LKP  ST YDLA EWYFA +  L+  
Sbjct: 694 GTGDL---------------------TANGGNPDLKPYESTNYDLAAEWYFAPSSMLSGE 732

Query: 762 VFYKDIYNFVTNGVNTVKFTNNGVTR--DVLVTQPYNAGHGTIKGFEVAYQQYFSFLPGA 819
           VFY+DI +++ +   T         R  D  VT P N     + G  V YQQ F      
Sbjct: 733 VFYRDISSYIVSTTTTQPLNPAPPARPGDYQVTTPVNVSDAKVTGVSVNYQQTFGL---- 788

Query: 820 LKGLGTQANFTYIDSEGARNAASNPYDTSQVSSLVGGARDDLPLEGLSKTSYNVAALYDL 879
             G G QAN+T+ +S+ +                       L L  LS+ +YNV   ++ 
Sbjct: 789 --GFGLQANYTFAESDSS---------------------SGLNLPYLSRDTYNVIPYWEH 825

Query: 880 GKVSARLAYNWRERFLQTTSAANKNIPAWFDDYGQLDGSIFYTIDDNLKVGFQAVNLTNT 939
           G  + R+ Y++R ++   T         + D Y QLD +  Y I D + + F A NL ++
Sbjct: 826 GDWTVRVNYSYRSKYF--TQIGRLQSRDFADAYKQLDLNASYQITDYMGITFGATNLLDS 883

Query: 940 KTKV 943
             +V
Sbjct: 884 TYRV 887



 Score =  131 bits (329), Expect = 2e-34
 Identities = 105/397 (26%), Positives = 184/397 (46%), Gaps = 44/397 (11%)

Query: 24  AAPSVVFAQQTAQDDQTVEEVVVTGQRAAIQSAQKIKQNAEQLVDSITSTDIGALPDRSV 83
           AAP    A         ++ + VTG RA+++ +Q +K++A  +VD+I++ DIG  PD + 
Sbjct: 31  AAPQA--APNAPSSTTELDTITVTGYRASLEKSQAVKRSANSIVDAISAEDIGKFPDINA 88

Query: 84  TEALQRVAGVTIARTSYGRDVDRISVEGSG-----VQVRGLSWVRGELNGRDSFSAKSGR 138
            E+L  + G+++ R  +G   +++S+ G+      V + G +   G+  G  + +  SGR
Sbjct: 89  AESLSHLPGISVDR-QFGEG-EKVSINGTDPALNRVLLNGQTIASGDWGGNPTDT--SGR 144

Query: 139 SLSFEDVPPELMAGVDVYKNPSADLVEGGVGGTVNLRTRLPFDSAKRIMAFSADMSIGDM 198
           + ++  + PE++  ++VYK P A + EG +GGTV + TR P D  K  +  S   +  D 
Sbjct: 145 TFNYTLLSPEIIGLMEVYKTPEARIDEGSIGGTVIVHTRKPLDLPKNTIRGSIGYNYNDR 204

Query: 199 SKKWKPTGSALYSDRWDTNIGELGFLVSLSESQLASRTDTISVDPYFARTNLVAGRTV-- 256
           S++  P GSAL+S  W  +    G L+S +  +       I    Y    N+ A  T+  
Sbjct: 205 SEEGNPRGSALWS--WKNDDETFGALISATHDKQDLARAGIEYFGYTTGANIPASATITG 262

Query: 257 --------YVPGGFGYRSLDFERERKGIAAAVQWRPNDQWDAALTFLRSSASQASTERAV 308
                    VP G         RER G+  A+QW+PN+Q +  LT L       +  +A 
Sbjct: 263 DGSDVATARVPAGISSAFFQQTRERSGLQGALQWKPNEQNEFNLTGLYIKGKYNNFSQAR 322

Query: 309 GFNPGSTNGPAAGTTFTYDSAGHFLK--------------GTLAQ---SPGGNSLGSSTL 351
              P  ++  A G   + D+ G+ ++              G +     +  G +   S L
Sbjct: 323 YVCPNCSSPAADG---SLDANGNQVQINNMRLIDRATVQDGVVTSANFADNGLAQPYSQL 379

Query: 352 DTRFADRSSVTSDYALKVNYNPNDKWAFSADIQYIYA 388
           DT + + +  T    L+ +++  +KW F+    Y  A
Sbjct: 380 DTIYRESTVTTKSLNLRHDWS-GEKWVFTTQGGYTEA 415