Pairwise Alignments

Query, 546 a.a., ABC transporter, ATP-binding protein cydD from Caulobacter crescentus NA1000

Subject, 558 a.a., multidrug ABC transporter ATP-binding protein from Azospirillum brasilense Sp245

 Score =  142 bits (357), Expect = 4e-38
 Identities = 139/526 (26%), Positives = 230/526 (43%), Gaps = 29/526 (5%)

Query: 36  ALVDGVAAIAFAAGLALSVDAIAQGLG-AASLAIWLAVAALALAVRGVLAMATGVLGARA 94
           A++ G+  + F   +   VD +         +A  +A+ A+ +A  G++A+ T   G   
Sbjct: 23  AVLSGLLELGFPMAVRAFVDQLLPTQDWPLIVAATVALLAIYMANGGLMAIVT-YWGHML 81

Query: 95  AANAKAALRLT----LSRAVFAG-PRRPAGEAATALVEGVEALDGHVARFLPTRLSAGVL 149
             N +  +R      L +  F+       G     +   ++ + G VA   P  L   V+
Sbjct: 82  GVNIETEMRRKSFDHLQKLSFSFYDNNKTGHLVGRVTRDLDEI-GEVAHHGPEDLLIAVM 140

Query: 150 PLLMIAAAAVASPIAAAIMLGTLIPFILAMILT--GSAAASEARAQFQALERLSALFLDR 207
             +          +  A++   ++P ++A + +  G       ++ +  +   +    + 
Sbjct: 141 TFVGAFTLMAVVHLPLALITAAIVP-VIAFVTSRYGGRMTKNWQSLYSRVGDFNVRIEEN 199

Query: 208 VRALPVVLAFQAEGATTVALTRSASNLAERTIRVLRVAFLSSAALEFFAALSVALVAVYC 267
           V  + VV AF  E            N   RT ++     ++++    + ++ + L+ V  
Sbjct: 200 VGGMRVVQAFTNEDHERKLFAED--NDRYRTTKLAAYKIMAASTTLSYMSMRLILIVV-- 255

Query: 268 GFNLLRLLPFPVPEQLDLARAFFVLALAPEVYAPMRRLAAAYHDRQAAEAASESLATFEA 327
              +L    F +  +L     F  L L    + P+ ++ A         A          
Sbjct: 256 ---MLTGAHFVLVGELTQGGFFAFLLLVNTFFRPIEKINAVIETYPRGIAGFRRYTQLLD 312

Query: 328 PPPCPARAPLA-AAPSL----RFDGVEIRYPDTDAPAVRDFDLVAPAGSITALVGTSGAG 382
             P  A AP A AAP+L    R++GV   Y D   P ++  DL   AGS  A VG SGAG
Sbjct: 313 TQPDIADAPGAVAAPALKGDIRYEGVSFGY-DPARPVLKGIDLSIKAGSTVAFVGPSGAG 371

Query: 383 KSSILNALLGLAPVTGGAISVND-----NPLTDISSDAAWAGQSPLILPASIADNIALAR 437
           K++I + L     V  G I+++        L  +        Q   +   +I +NIA  R
Sbjct: 372 KTTICSLLPRFYEVMAGRITIDGLDIRAMTLASLRRQIGIVQQDVFLFGGTIRENIAYGR 431

Query: 438 RDASRAEIAEAAQRAGLGPALAVRPGGLDFVLDERGSGLSGGERRRLSLARALLKPAPIL 497
             A  AEI EAA+RA L   +A  P GLD V+ ERG  LSGG+++RL++AR  LK  PIL
Sbjct: 432 LGAGDAEIMEAARRAHLDGLIASLPEGLDTVIGERGVKLSGGQKQRLTIARMFLKNPPIL 491

Query: 498 LLDEPTANLDAEAEAAMIEAIREAAQGRTTLIATHSEAVAALADKV 543
           +LDE T+ LD + E  + +++ E A+GRTTL+  H  A    AD+V
Sbjct: 492 ILDEATSALDTQTEREIQKSLMELAEGRTTLVIAHRLATIRNADEV 537