Pairwise Alignments

Query, 546 a.a., ABC transporter, ATP-binding protein cydD from Caulobacter crescentus NA1000

Subject, 594 a.a., Transport ATP-binding protein CydCD from Xanthomonas campestris pv. campestris strain 8004

 Score =  156 bits (394), Expect = 2e-42
 Identities = 160/531 (30%), Positives = 239/531 (45%), Gaps = 28/531 (5%)

Query: 34  LLALVDGVA--AIAFAAGLALSVDAIAQGLGAASLAIWLAVAALA--LAVRGVLAMATGV 89
           LL L+ G A  A+A   G+ L VDA++      +  +W  +      +AV  +     G 
Sbjct: 34  LLVLIIGAAGCAVAVQYGMKLLVDAMSTDQRTQA-DVWTPLGLFIGLIAVENLFWRLGGW 92

Query: 90  LGARAAANAKAALRLTLSRAVFAGPRRPAGEA-ATALVEGVEALDGHVARFLPTRLSAGV 148
           LG R    +   +R+ L R +   P R   E  A AL   + AL G  A  +   L+  +
Sbjct: 93  LGCRTVVASVVDIRVDLFRHLTGHPMRYFTEHFAGALGNRITAL-GTAAGQIYGGLAWKI 151

Query: 149 LPLLMIAAAAVASPIAAAI-MLGTLIPFI--LAMILTGSAAASEARAQFQALE--RLSAL 203
           LP ++    A+         M  TLI F+  +A I+TG      A+ Q  A +  R+   
Sbjct: 152 LPPIVDFIGAIVVLFTVDWRMAATLIGFVAVVAAIITGFGIRGRAKHQSFAAQAARVGGE 211

Query: 204 FLDRVRALPVVLAFQAEGATTVALTRSASNLAERTIRVLRVAFLSSAALEFFAALSVALV 263
            +D V  +  + AF A    +  L +   + A    R       S   +E    +    +
Sbjct: 212 LVDAVSNVWTIKAFAARDRESARLAQEIGHEAVAHRR-------SWMYVEKARVIHDICL 264

Query: 264 AVYCGFNLLRLLPFPVPEQLDLARAFFVLALAPEVYAPMRRLAAAYHDR-QAAEAASESL 322
           ++  G  L+  +       +       V AL   +    R LA    D  Q   A +++L
Sbjct: 265 SIMAGGMLIWAISAWRGGAVSAGDVVLVSALTFRILHGSRDLALTLVDTTQQLGAIADTL 324

Query: 323 ATFEAPPPCP-ARAPLAAAPS-LRFDGVEIRYPDTDAPAVRDFDLVAPAGSITALVGTSG 380
                P   P A APLA A   +RF+GV   YPD  A  +   DL  PAG    +VG SG
Sbjct: 325 QIILQPHALPDADAPLALAEGDVRFEGVRFAYPDRPA-VIEALDLHIPAGQKVGIVGPSG 383

Query: 381 AGKSSILNALLGLAPVTGGAISVNDNPLTDISSDA-----AWAGQSPLILPASIADNIAL 435
           AGKS+++  +  L  V  G + ++   +  +S D+     A   Q   +   SIADNI  
Sbjct: 384 AGKSTLIALIQRLDDVESGRVLIDGQDIRSVSQDSLRDRIAVVPQETALFNRSIADNIRY 443

Query: 436 ARRDASRAEIAEAAQRAGLGPALAVRPGGLDFVLDERGSGLSGGERRRLSLARALLKPAP 495
            R +AS AE+  AA+ A     +   P G + ++ ERG  LSGG+R+RL +ARA LK AP
Sbjct: 444 GRPEASDAEVHTAARHAFCDGFIRELPQGYNTLVGERGVMLSGGQRQRLGIARAFLKDAP 503

Query: 496 ILLLDEPTANLDAEAEAAMIEAIREAAQGRTTLIATHSEAVAALADKVVRL 546
           IL+LDE T+ LD E+EA +  A+    +GRT L   H  +     D++V L
Sbjct: 504 ILILDEATSALDTESEAEIQSALDHLMRGRTVLAVAHRLSTVIGFDRIVVL 554