Pairwise Alignments

Query, 546 a.a., ABC transporter, ATP-binding protein cydD from Caulobacter crescentus NA1000

Subject, 607 a.a., Transport ATP-binding protein CydD from Xanthomonas campestris pv. campestris strain 8004

 Score =  269 bits (688), Expect = 2e-76
 Identities = 203/556 (36%), Positives = 289/556 (51%), Gaps = 43/556 (7%)

Query: 20  QWERTVAPTVRRASLLA----LVDGVAAIAFAAGLALSVDAI-AQGLGAASLA---IWLA 71
           QW   +A    RA  LA     + GV  +  +A +A  + ++  Q    A L    + L 
Sbjct: 56  QWLDALAAPATRARRLAGVAVTISGVLLLLQSAAIAWLIQSVLVQHRPLAELGHVGLGLL 115

Query: 72  VAALALAVRGVLAMATGVLGARAAANAKAALRLTLSRAVFA-GP----RRPAGEAATALV 126
            AA+  A+ G  A +   L    A  AK ALRL ++R +   GP    R+ +GE     +
Sbjct: 116 GAAIGRALCGAWAQS---LAGEVADVAKHALRLRIARRLLEHGPVWLRRQRSGELGELSL 172

Query: 127 EGVEALDGHVARFLPTRLSAGVLPLLMIAAAAVASPIAAAIMLGT--LIPFILAMILTGS 184
              +AL+G+   +   R    V+P L++ A      +   ++L T  LIPF   M+L G 
Sbjct: 173 AHSDALEGYFVGYQLARTEMLVVPGLILLAVFSVDWVVGLVLLLTAPLIPFF--MMLVGW 230

Query: 185 AAASEARAQFQALERLSALFLDRVRALPVVLAFQAEGATTVALTRSASNLAERTIRVLRV 244
            A +  R Q   L R+   F DR++ L ++  +    A    +  +A  + ER+++VLR+
Sbjct: 231 GAEAAGREQLGELARMGGHFADRLKGLGLLRVYGRGEAELGGIAAAADGVRERSLKVLRI 290

Query: 245 AFLSSAALEFFAALSVALVAVYCGFNLLRLLPFP-VPEQLDLARAFFVLALAPEVYAPMR 303
           AFLSS  LEFFA++SVA+VA+Y G + L +L    +P    L    F L LAPE +AP+R
Sbjct: 291 AFLSSTVLEFFASVSVAIVALYFGLSYLGMLDLHGLPS---LGTGMFCLLLAPEFFAPLR 347

Query: 304 RLAAAYHDRQAAEAA---SESLATFEAPPPCPARAPL----------AAAPSLRFDGVEI 350
           RLAA YHDR  A AA   +E L    APP    + P           A AP L+  G+ +
Sbjct: 348 RLAAHYHDRANALAAVSEAERLLHGFAPPAVAVQVPAVPARPLEPAQAHAPLLQARGLAV 407

Query: 351 RYPDTDAPAVRDFDLVAPAGSITALVGTSGAGKSSILNALLGLAPVTGGAISVNDNPLTD 410
           R P +    VRDF L   AG   ALVG SG+GKS++L  L G   + GG+++V       
Sbjct: 408 RPPGSPVQVVRDFSLALEAGQRVALVGPSGSGKSTLLEGLAGWLELEGGSLAVRPGVRI- 466

Query: 411 ISSDAAWAGQSPLILPASIADNIALARRDASRAEIAEAAQRAGLGPALAVRPGGLDFVLD 470
                 +A Q P +   SIADN+ LA   A+ A +   A  A +   +   P GLD V+ 
Sbjct: 467 -----GYAPQRPYLFHGSIADNLRLADPQANEARLRAVADAAQVLRFVTHLPDGLDTVIG 521

Query: 471 ERGSGLSGGERRRLSLARALLKPAPILLLDEPTANLDAEAEAAMIEAIREAAQGRTTLIA 530
           ERG GLSGGE RR++LAR LL+   +LLLDEPTA LD + EA ++ ++   A+GR  ++A
Sbjct: 522 ERGFGLSGGEARRVALARLLLREPDVLLLDEPTAFLDPDTEADLLRSLALFARGRAVVLA 581

Query: 531 THSEAVAALADKVVRL 546
           THS AV   AD V+ L
Sbjct: 582 THSAAVMQWADTVIDL 597