Pairwise Alignments

Query, 532 a.a., ABC transporter, ATP-binding protein cydC from Caulobacter crescentus NA1000

Subject, 591 a.a., cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) from Shewanella loihica PV-4

 Score =  192 bits (487), Expect = 4e-53
 Identities = 177/551 (32%), Positives = 251/551 (45%), Gaps = 70/551 (12%)

Query: 12  IRAQKRQRAAGLRLAALSAVTVGAASTLLLGLSGWFIVASAAAGAAGLAAAHAFNVLLPS 71
           I+  KRQ    L +  L ++T   A   LL LSGWF+ A+A AG + +  A AFN   P+
Sbjct: 8   IKLFKRQWLMML-VGLLLSLTTLMAGIGLLSLSGWFLSATAVAGLS-VVTAQAFNYFTPA 65

Query: 72  AGIRFLAILRTAARYGERLSGHAAALRALAAIRPAVFESLAAAPPTESLALSRGEASARL 131
            G+RFL+I RTA+RYGERL+ H A  R L  +R   +  L      E   L  G+   RL
Sbjct: 66  GGVRFLSIARTASRYGERLATHEATFRLLTELRTWAWGKLMPLSAKELSHLRGGDLLNRL 125

Query: 132 VQDVDAIETRFVRLSAPWSAAAGLGAGVALALLAGWIPALSILTAASAAT----LLARAL 187
           V D+D ++  ++RL  P  A+  + A  AL     W  +   LT          LL    
Sbjct: 126 VADIDTLDHLYLRLITPLLASLLMIA--ALYGFLAWFDSELALTLCGVLLTLWFLLPLVF 183

Query: 188 ARRYSAPARAAIQARTGALKDSVAALVSASAELRAYGLAD-WAGETLNARA---ASLEDA 243
            R    P  A +++R    +  +   +   AEL  +G    +  E  +A+A   AS    
Sbjct: 184 YRLGHRPGIAQLESRR-QYRVLLLEYLQGQAELTLFGAEKRFRAELDSAQAKLFASQSTM 242

Query: 244 RRAAARAQGLIVASQS---VIAGLAVAAAVACAAPAGAALAALAGLAAVMSLDALTSLAA 300
               A +Q L++ S     V+     A  V    P G  L AL     +  ++ L  LA 
Sbjct: 243 TAVTALSQALLILSHGLALVLLCYLAADGVGDKVPPG-PLLALVVFMTLACIEMLMPLAG 301

Query: 301 AFDQDGAAHEARTRLDAVLRHRPKAAPSS--------------------PPGPQPLTLLG 340
           AF    A  +A  R+  +   RP                           PG + L  L 
Sbjct: 302 AFQHLSACVQAAERVSEITERRPSIGYGEEASLAASRGALSIAGVSFGYQPGQRVLDDLS 361

Query: 341 LTLRPGERLAVSGPSGCGKTTAIE-----------TLL----GLRESGSLTPREAFAWLP 385
           L ++PGE+LA+ G +GCGK++ +            TLL     + +      R A   + 
Sbjct: 362 LEVKPGEKLALLGQTGCGKSSLLSLITREWTPDAGTLLLDGRPIEDYSEQALRRAMTVVS 421

Query: 386 QDAGLVAGTVRDNLRLA----APTAS--DEDLWAALDDACL--------ADRIRAAPEGL 431
           Q   L AGT+RDNL LA    AP  S  +   W   +DA L         + +    + L
Sbjct: 422 QRIYLFAGTLRDNLTLAQFEQAPEGSRAERKAWREANDAKLIEVLERVGLETLTQGEKPL 481

Query: 432 LAYVGDDGERLSGGERRRLALARAYLRDAPWLLLDEPTEGLDPVTEAAVVA-RLDARLQR 490
             ++G+ G +LSGGERRR+ +ARA LRDAP LLLDEPTEGLD  TE  ++A  LD    +
Sbjct: 482 DNWIGEGGRQLSGGERRRIGVARALLRDAPLLLLDEPTEGLDQRTEREIMALLLDFAKDK 541

Query: 491 TGQGLVLVSHR 501
           T   +V++SHR
Sbjct: 542 T---MVMISHR 549