Pairwise Alignments

Query, 532 a.a., ABC transporter, ATP-binding protein cydC from Caulobacter crescentus NA1000

Subject, 726 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  102 bits (254), Expect = 5e-26
 Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 37/284 (13%)

Query: 255 VASQSVIAGLAVAAAVACAAPAGAALAALAGL--------AAVMSLDALTSLAAAFDQDG 306
           VA   +  G  + AAV  ++ A + +A LAGL        +A+  LD + +    F+  G
Sbjct: 418 VADNDISMG-GIIAAVILSSRAISPMAQLAGLMTRGNHTASALRQLDQIMTQEDEFENKG 476

Query: 307 ---AAHEARTRLDAVLRHRPKAAPSSPPGPQP-LTLLGLTLRPGERLAVSGPSGCGKTTA 362
              + H  + +++A        + + P   +P L  + L++ PGER+A+ G +G GK+T 
Sbjct: 477 HLVSKHRLKGQINA-----DHVSFNYPGSERPVLHPMSLSIAPGERIAIIGRNGSGKSTL 531

Query: 363 IETLLGLRE------------SGSLTP---REAFAWLPQDAGLVAGTVRDNLRLAAPTAS 407
            + L+GL +            S  + P   R  F +LPQD  L  GT+RDN+       +
Sbjct: 532 AKLLVGLYQPTKGSLRYDGLDSAQIHPTDLRRNFGYLPQDITLFHGTIRDNILFGTRQVT 591

Query: 408 DEDLWAALDDACLADRIRAAPEGLLAYVGDDGERLSGGERRRLALARAYLRDAPWLLLDE 467
           +  L  A+  + +        EGL   VG+ G+ LS G+R+ +ALARA L D P LL+DE
Sbjct: 592 EHQLIRAVQLSGVNQFTDIETEGLDQQVGEGGQSLSRGQRQTIALARATLNDPPVLLMDE 651

Query: 468 PTEGLDPVTEAAVV-ARLDARLQRTGQGLVLVSHRAAPLAICPR 510
           PT  LD   E   + A  +   +RT   L+L++H+   L +  R
Sbjct: 652 PTASLDARAEKQFIRAMRNVSKERT---LLLITHKMHLLNLVDR 692