Pairwise Alignments

Query, 807 a.a., PAS family GGDEF/EAL protein from Caulobacter crescentus NA1000

Subject, 889 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  400 bits (1029), Expect = e-115
 Identities = 233/548 (42%), Positives = 323/548 (58%), Gaps = 11/548 (2%)

Query: 241 DWLWEVDAAGRLTYVSDRMAAAAGVDKDALLGQPMSDLCGAAEAPGGPVAALSALFAEQK 300
           D  W  D A R   V++  A   G   + ++G+ +  +   A A        + L + + 
Sbjct: 342 DLAWIKDNAFRFHAVNEAYARMCGKPAEEIVGKTVFQVWPEALARTFQNHDEAVLASGKP 401

Query: 301 TFRDVVVSITVADDAGRPATHWWALSAKPVHDLDGLFVGFRGVGADITQAREDQERISHL 360
              +V+V+    +  G+P T  +     PVH+ +G  VG  G+  DIT+ +E + RI HL
Sbjct: 402 GHFEVLVT----NGEGQPRTLDYI--RVPVHNEEGEVVGMAGIARDITERKEAEARIRHL 455

Query: 361 AHYDVLTQLPNRLSLLQNLGKAWMDHGRDKTSGCAVLCLDLDHFKGVNDSLGHPVGDALL 420
           A +D LT LPNR  L   +  A ++      +  A+L LDLDHFK +NDSLGH VGD LL
Sbjct: 456 AEHDALTDLPNRSLLSSRMADA-INRSVGSQAPMALLLLDLDHFKNINDSLGHEVGDKLL 514

Query: 421 MQVASRLRSCVGETGMVARLGGDEFAVVCAPSPGHEALSALSQSIVETLSAPYDILGHNV 480
              A RLR  +     ++R GGDEFA++     G   +  ++Q ++ET++ P+++ GH +
Sbjct: 515 QLAAERLRHTLDAADTLSRSGGDEFAILLTECSGAPMIGRIAQRLLETMAQPFNVDGHEL 574

Query: 481 LIGASVGIAVAPFDADDPDGLLKNADLALYRAKGDGRGAYRFFETAMDVWAQERRALEMD 540
           ++ ASVGI++ P D  D   LLKNAD A+Y AK  GR  Y+FF   M+    ER +LE  
Sbjct: 575 VLSASVGISMYPHDGTDLGALLKNADAAMYSAKAAGRNTYQFFTPEMNARVFERLSLENS 634

Query: 541 LREALARDELKLFFQPLIGRRDNETTGFEALLRWQHPTRGLVPPSDFIECAEQWGLIGRI 600
           LR+AL R EL L++QP       +  GFEALLRW+HP  GLVPP+ FI  AE+  LI  I
Sbjct: 635 LRKALPRQELMLYYQPQYRVGGGDPIGFEALLRWRHPELGLVPPARFIPIAEETNLILPI 694

Query: 601 GEWVLNEACRTAATW----PSHLTVAVNLSPNQFASGDLVDQVRAALKASGLAPARLELE 656
           GEWVL EACR    W        TVAVNLSP QF   +LV  V+  L  +GL  A+LELE
Sbjct: 695 GEWVLAEACRQQMAWQRAGQPATTVAVNLSPVQFRQRNLVSLVQRVLAETGLPAAQLELE 754

Query: 657 ITEGLLLHDSAKTLEQLAALKALGVKIAMDDFGTGYSSLAYLWRFPFDKIKIDRSFVAEM 716
           ITE LL+ D+ + +E L  LK+LG+++++DDFGTGYSSL+YL RFP DKIKID+SFV +M
Sbjct: 755 ITESLLMDDTERAVEVLHELKSLGIRLSLDDFGTGYSSLSYLKRFPLDKIKIDQSFVRDM 814

Query: 717 QDNVAIADILRTIALLGQTLNLEVTAEGVETQAQARLLAEMRCDQFQGFLFGRPMPVGDI 776
             +   A I++ I  +   L L V AEGVE Q+Q   LA  +C + QG+LF  P+P  ++
Sbjct: 815 IKDSGDAAIIQAIIAIAAKLELGVIAEGVENQSQLDYLALHQCGEVQGYLFSPPVPAAEV 874

Query: 777 PSFLMAAT 784
             F  +AT
Sbjct: 875 CRFFNSAT 882