Pairwise Alignments

Query, 807 a.a., PAS family GGDEF/EAL protein from Caulobacter crescentus NA1000

Subject, 972 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  355 bits (912), Expect = e-102
 Identities = 205/535 (38%), Positives = 294/535 (54%), Gaps = 10/535 (1%)

Query: 247 DAAGRLTYVSDRMAAAAGVDKDALLGQPMSDLCGAAEAPGGPVAALSALFAEQKTFRDVV 306
           DA GR+  V+   +   G  +    G+    +  + +      A +     EQ  ++  V
Sbjct: 429 DARGRIQSVNPAFSEVTGYSEADARGRAPGHILASGQHDPAFYAQMWQSLQEQGKWQGEV 488

Query: 307 VSITVADDAGRPATHWWALSAKPVHDLDGLFVGFRGVGADITQAREDQERISHLAHYDVL 366
           ++      +G     W +++A  + D  G    + G+  DIT  ++ +  I HLA++D L
Sbjct: 489 IN---RRKSGETYPEWLSITA--IKDGAGQVSQYVGLFTDITDRKQAEAHIHHLAYHDPL 543

Query: 367 TQLPNRLSLLQNLGKAWMDHGRDKTSGCAVLCLDLDHFKGVNDSLGHPVGDALLMQVASR 426
           T LPNR      L  A     R +    AVL LDLD FK VND+LGH  GD LL +V +R
Sbjct: 544 TGLPNRRLFYDRLENALRQAHRSRRK-LAVLLLDLDRFKAVNDTLGHDQGDLLLKEVGAR 602

Query: 427 LRSCVGETGMVARLGGDEFAVVCAPSPGHEALSALSQSIVETLSAPYDILGHNVLIGASV 486
           L  C+ E   +ARLGGDEF ++       E  S ++  ++     P  +    +    S+
Sbjct: 603 LSLCLREGDTLARLGGDEFVLLLPEVLSAEDASIVAGKLLAQFDQPVRLGEREIFASTSI 662

Query: 487 GIAVAPFDADDPDGLLKNADLALYRAKGDGRGAYRFFETAMDVWAQERRALEMDLREALA 546
           GIA+ P D +D + LLK+AD+A+Y AK  GR AYRFF  + +  + ER  LE DLR A+ 
Sbjct: 663 GIALYPADGEDGESLLKHADVAMYAAKDGGRAAYRFFIASHNERSLERLELENDLRRAVE 722

Query: 547 RDELKLFFQPLIGRRDNETTGFEALLRWQHPTRGLVPPSDFIECAEQWGLIGRIGEWVLN 606
            ++L L++QP IG       G EAL+RW+HPTRGLV P  FI  AE  GLI  IG W L 
Sbjct: 723 GEQLLLYYQPQIGASSGRIAGVEALVRWRHPTRGLVMPDSFIALAENAGLIDAIGHWCLV 782

Query: 607 EACRTAATWPSH----LTVAVNLSPNQFASGDLVDQVRAALKASGLAPARLELEITEGLL 662
            ACR    W         VAVN+S  Q    D   +V   +  SG+ PA LELE+TE  L
Sbjct: 783 AACRQLRAWQEQGVPVPRVAVNVSARQLRRWDFAQEVLQVVTQSGIDPAGLELELTESSL 842

Query: 663 LHDSAKTLEQLAALKALGVKIAMDDFGTGYSSLAYLWRFPFDKIKIDRSFVAEMQDNVAI 722
             D  + L   + L+  GV++++DDFGTGYSSL+YL R+P D++KIDRSFV+ + D+   
Sbjct: 843 ADDPEQILAIFSTLRQAGVRVSIDDFGTGYSSLSYLSRYPVDEVKIDRSFVSRLLDDREA 902

Query: 723 ADILRTIALLGQTLNLEVTAEGVETQAQARLLAEMRCDQFQGFLFGRPMPVGDIP 777
             ++R + LL   L +   AEGVET+AQ ++L+++ CD+ QG+LF +P+P   IP
Sbjct: 903 RSVVRAVILLAHGLGMRTVAEGVETEAQWQVLSDLDCDELQGYLFSKPVPPHQIP 957



 Score = 28.5 bits (62), Expect = 0.002
 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 7/111 (6%)

Query: 192 LLVFCYAVVIVSCLSHARIFAERLVAADELEKQKQVVSLLLSDFEEGASDWLWEVDAAGR 251
           LL+  +A+ +++ + +  I  E   +A EL      +  + +   EG    +  +D  GR
Sbjct: 256 LLLALFALFLIATVVY--IMVELKKSALELGHSHAFLDNIANTLAEG----ILALDRGGR 309

Query: 252 LTYVSDRMAAAAGVDKDALLGQPMSDLCGAAEAPGGPVAALSALFAEQKTF 302
           +T+ + R  A  G     LLG+  + +     AP   V+ L+   A    F
Sbjct: 310 ITFANQRAEALLGAAPGGLLGRDAATVLWPGAAP-AEVSGLARALATGAVF 359